Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
TRIM54Q9BYV2 HSPD1P14-201ENST00000432666 1618 ntBASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 AL359715.4-201ENST00000606629 1436 ntBASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 OR56A4-201ENST00000330728 1209 ntBASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 MIR551B-201ENST00000384984 96 ntBASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 AL355615.1-201ENST00000406187 641 ntBASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 RN7SKP129-201ENST00000410288 299 ntBASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 MTCYBP7-201ENST00000419540 1134 ntBASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 BX119904.1-201ENST00000432026 348 ntBASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 AC128677.1-201ENST00000436016 442 ntBASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 AL353898.1-201ENST00000444055 238 ntBASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 POU5F1P5-201ENST00000445059 658 ntBASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 RN7SL326P-201ENST00000477493 296 ntBASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 RBBP4P1-201ENST00000502424 1276 ntBASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 OR5H3P-201ENST00000502817 919 ntBASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 AC105420.1-201ENST00000504389 582 ntBASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 AC135983.3-201ENST00000528049 1226 ntBASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 AP003066.2-201ENST00000529375 555 ntBASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 AC090666.1-201ENST00000578241 445 ntBASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 AC021851.1-201ENST00000608537 1082 ntBASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 AL136984.1-201ENST00000607611 1893 ntBASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 HSPD1P7-201ENST00000447985 1686 ntBASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM54Q9BYV2 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM54Q9BYV2 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM54Q9BYV2 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
TRIM54Q9BYV2 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM54Q9BYV2 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM54Q9BYV2 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.16□□□□□ -1.42
TRIM54Q9BYV2 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM54Q9BYV2 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.16□□□□□ -1.42
TRIM54Q9BYV2 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM54Q9BYV2 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
TRIM54Q9BYV2 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM54Q9BYV2 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM54Q9BYV2 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM54Q9BYV2 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM54Q9BYV2 RPS3AP25-201ENST00000411660 793 ntBASIC6.16□□□□□ -1.42
TRIM54Q9BYV2 RPS26P38-201ENST00000414476 348 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms