Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 AC120042.1-201ENST00000524309 550 ntTSL 5 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 AC009806.1-201ENST00000526112 519 ntTSL 3 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 AP006287.1-201ENST00000533995 653 ntBASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 GPRASP2-204ENST00000535209 3847 ntAPPRIS P1 TSL 4 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 DAZAP2-210ENST00000551313 587 ntTSL 3 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 AC009065.7-201ENST00000561544 580 ntTSL 3 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 AC025284.1-201ENST00000564358 579 ntTSL 4 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 ABCC6P1-203ENST00000565566 1170 ntBASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 RN7SL190P-201ENST00000582519 257 ntBASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 MIR4761-201ENST00000585066 82 ntBASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 AC092329.1-201ENST00000594653 574 ntTSL 5 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 AC013643.3-201ENST00000623825 2596 ntBASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 LRRC41-207ENST00000617190 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 TACC2-206ENST00000368999 3879 ntTSL 5 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 CES2-202ENST00000417689 3868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 PLEK-201ENST00000234313 2869 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 OSBP2-204ENST00000407373 3669 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 TCP11L2-202ENST00000546625 3198 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 TRPV5-203ENST00000442623 2120 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 ZNF615-202ENST00000391795 2698 ntTSL 2 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 IFIT5-201ENST00000371795 4015 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 FOSB-201ENST00000353609 3775 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 SYT14-202ENST00000367019 2997 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 CD44-210ENST00000434472 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 CD226-206ENST00000581982 2157 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 PDPN-212ENST00000621990 2738 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 ALDH3A2-202ENST00000339618 3828 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 CPEB1-208ENST00000611163 1919 ntTSL 2 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 GUCD1-213ENST00000621833 3584 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 L1CAM-201ENST00000361699 3888 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 AC004947.1-201ENST00000420912 2781 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 FAM131A-211ENST00000639617 4450 ntTSL 5 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 C4orf33-201ENST00000281146 6170 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
KRTAP3-3Q9BYR6 AL355602.1-201ENST00000641472 3402 ntBASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 AP1G1-218ENST00000569748 4554 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 YME1L1-207ENST00000477432 3474 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 ZNF641-203ENST00000544117 7819 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 CLDN4-202ENST00000431918 4108 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 ELOVL1-202ENST00000413844 1451 ntTSL 2 BASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 AC139426.3-201ENST00000605648 2059 ntBASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 TIGIT-201ENST00000383671 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 CDH4-202ENST00000611855 3304 ntTSL 5 BASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 ARHGAP44-201ENST00000262444 3001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 MAP4-210ENST00000439356 2743 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 LAMP3-201ENST00000265598 3375 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 HNRNPDL-201ENST00000295470 3781 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 SLC12A4-219ENST00000576616 3768 ntTSL 2 BASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 LINC01001-203ENST00000607448 1569 ntTSL 5 BASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 STAG1-203ENST00000434713 5064 ntTSL 5 BASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 SPACA5-201ENST00000304355 648 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 RNU6-105P-201ENST00000363909 104 ntBASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 ARMCX7P-201ENST00000372828 562 ntBASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 SHC3-201ENST00000375831 569 ntTSL 2 BASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 AL451046.2-201ENST00000403074 277 ntBASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 RNA5SP44-201ENST00000410446 133 ntBASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 RNU2-55P-201ENST00000411146 174 ntBASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 CCDC153-202ENST00000415318 1173 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 BX088651.3-201ENST00000418155 352 ntBASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 AC246787.2-202ENST00000418566 370 ntTSL 3 BASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 SNRPCP15-201ENST00000424055 192 ntBASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 ATP6V0E1P4-201ENST00000427294 242 ntBASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 AC128677.1-201ENST00000436016 442 ntBASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 AL031597.1-201ENST00000447383 432 ntBASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 AC090804.1-201ENST00000448870 490 ntBASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 XIAP-AS1-201ENST00000458331 482 ntTSL 3 BASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 ZEB2-214ENST00000462355 656 ntTSL 4 BASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 AL591473.1-201ENST00000464297 313 ntBASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 AC068298.1-201ENST00000465165 161 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms