Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 HMGN1P2-201ENST00000445197 310 ntBASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 RNU1-88P-201ENST00000459274 128 ntBASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 AC094085.1-201ENST00000468914 584 ntBASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 LSM3P4-201ENST00000502948 309 ntBASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 PRMT5P1-201ENST00000514351 598 ntBASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 SCARNA18.1-201ENST00000516330 83 ntBASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 AC021678.3-201ENST00000517893 476 ntBASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 OR8Q1P-201ENST00000526467 655 ntBASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 HMGN2P36-201ENST00000529541 409 ntBASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 AGGF1P7-201ENST00000562369 913 ntBASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 NANOGP3-201ENST00000605855 286 ntBASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 MIR6133-201ENST00000617057 108 ntBASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 AC245014.3-201ENST00000618589 347 ntBASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 AC024884.1-201ENST00000620583 399 ntBASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 AL359742.1-201ENST00000622497 540 ntBASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 AC007938.2-201ENST00000604666 2634 ntBASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RSPO3Q9BXY4 IFIT1P1-201ENST00000400497 1449 ntBASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 AC026523.2-201ENST00000625039 7739 ntBASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 AL121886.1-201ENST00000358609 435 ntBASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 SNORA64.1-201ENST00000362600 132 ntBASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 AC005522.1-201ENST00000395416 346 ntBASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 MIR1203-201ENST00000408812 85 ntBASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 OR10T1P-201ENST00000424327 947 ntBASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 AC069154.1-201ENST00000432914 542 ntBASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 NDUFB4P8-201ENST00000435351 367 ntBASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 SNORD125-201ENST00000459538 96 ntBASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 NDUFA5P5-201ENST00000468361 342 ntBASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 AP002884.1-201ENST00000479691 655 ntBASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 AC125494.2-201ENST00000602431 657 ntBASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 AL049840.6-201ENST00000604583 345 ntBASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 AL365181.4-201ENST00000609800 547 ntBASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 MIR6862-1-201ENST00000613016 70 ntBASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 MIR6862-2-201ENST00000614755 70 ntBASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 RNA5SP439-201ENST00000617595 124 ntBASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 AC025262.3-201ENST00000623666 360 ntBASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 PDZK1P1-202ENST00000425209 1350 ntBASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 SAMM50P1-201ENST00000455403 1399 ntBASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 CASC19-238ENST00000641523 1558 ntBASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
RSPO3Q9BXY4 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms