Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 ZNF567-204ENST00000588311 2042 ntTSL 2 BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 RNU6-331P-201ENST00000384724 107 ntBASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 SNORA11-201ENST00000408789 128 ntBASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 RPS3AP9-201ENST00000417027 792 ntBASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 AC007394.1-201ENST00000421941 531 ntBASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 RPL21P43-201ENST00000425440 472 ntBASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 AL512593.1-201ENST00000444758 779 ntBASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 AL121578.2-201ENST00000448797 447 ntBASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 RPL31P15-201ENST00000449770 338 ntBASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 BZW1P1-201ENST00000454901 1240 ntBASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 AC007731.3-201ENST00000458154 446 ntTSL 5 BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 RPL7P24-201ENST00000493052 752 ntBASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 TRMT10BP1-201ENST00000519377 943 ntBASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 NPIPB14P-203ENST00000532298 987 ntBASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 AP002453.2-201ENST00000533503 320 ntBASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 OR4A40P-201ENST00000533878 948 ntBASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 NACA-211ENST00000548563 827 ntTSL 5 BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 AL355922.4-201ENST00000555642 449 ntTSL 3 BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 NDUFA3P4-201ENST00000560814 250 ntBASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 AC090651.1-201ENST00000567865 634 ntBASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 SMIM12P1-201ENST00000603004 274 ntBASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 AC004241.2-201ENST00000614562 444 ntBASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 AC005858.4-201ENST00000623191 700 ntBASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 TET1P1-201ENST00000426627 2301 ntBASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 LINC02102-201ENST00000503989 3364 ntTSL 2 BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 AC005539.1-201ENST00000443768 1479 ntBASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 AC011195.2-201ENST00000583666 1486 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 RAD51B-211ENST00000487861 1673 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 MPZL3-201ENST00000278949 3968 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 NEK6-204ENST00000373603 3447 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 SEC31A-227ENST00000508502 3801 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 MAPK10-202ENST00000359221 2668 ntTSL 5 BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 MAPK10-204ENST00000395157 2665 ntTSL 5 BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 LINC01613-201ENST00000561476 2780 ntBASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 RUBCNL-206ENST00000409879 2997 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
COL25A1Q9BXS0 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC7.52□□□□□ -1.2
COL25A1Q9BXS0 OR4G11P-202ENST00000642116 1414 ntBASIC7.52□□□□□ -1.2
COL25A1Q9BXS0 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
COL25A1Q9BXS0 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC7.52□□□□□ -1.2
COL25A1Q9BXS0 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC7.52□□□□□ -1.2
COL25A1Q9BXS0 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
COL25A1Q9BXS0 HGD-201ENST00000283871 2005 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
COL25A1Q9BXS0 BCO2-201ENST00000357685 2930 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 ZSCAN23-201ENST00000289788 3126 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 GALR1-201ENST00000299727 10044 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 ZNF185-203ENST00000324823 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 AC007406.5-201ENST00000570140 3170 ntBASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 SRPK2-214ENST00000489828 2560 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 TFDP2-212ENST00000486111 2360 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 MIGA1-202ENST00000443751 6409 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 LARP1BP1-201ENST00000506036 1359 ntBASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 Y_RNA.145-201ENST00000363527 102 ntBASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 BPHL-201ENST00000380368 797 ntTSL 5 BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 RNU6-780P-201ENST00000391030 104 ntBASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 MTCO3P40-201ENST00000392516 676 ntBASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 AC004386.1-201ENST00000393214 761 ntBASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 CALM2P3-201ENST00000400429 449 ntBASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 ST13P16-201ENST00000401760 781 ntBASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 AL391422.1-201ENST00000402155 436 ntBASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 AP000357.1-201ENST00000409926 1165 ntBASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC7.52□□□□□ -1.21
COL25A1Q9BXS0 ARAFP1-201ENST00000422172 605 ntBASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms