Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
TPM4P67936 AC092376.2-201ENST00000622621 4116 ntBASIC6.35□□□□□ -1.39
TPM4P67936 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
TPM4P67936 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TPM4P67936 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.35□□□□□ -1.39
TPM4P67936 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TPM4P67936 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
TPM4P67936 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TPM4P67936 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TPM4P67936 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TPM4P67936 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TPM4P67936 AC015689.2-201ENST00000528172 1738 ntBASIC6.34□□□□□ -1.39
TPM4P67936 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TPM4P67936 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.34□□□□□ -1.39
TPM4P67936 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.34□□□□□ -1.39
TPM4P67936 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
TPM4P67936 AC005042.1-201ENST00000393397 800 ntBASIC6.34□□□□□ -1.39
TPM4P67936 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.34□□□□□ -1.39
TPM4P67936 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.34□□□□□ -1.39
TPM4P67936 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC6.34□□□□□ -1.39
TPM4P67936 RPL35AP3-201ENST00000414680 288 ntBASIC6.34□□□□□ -1.39
TPM4P67936 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.34□□□□□ -1.39
TPM4P67936 RN7SL269P-201ENST00000467795 305 ntBASIC6.34□□□□□ -1.39
TPM4P67936 EIF3LP3-201ENST00000495197 822 ntBASIC6.34□□□□□ -1.39
TPM4P67936 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.34□□□□□ -1.39
TPM4P67936 PMS2P3-207ENST00000529061 717 ntBASIC6.34□□□□□ -1.39
TPM4P67936 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
TPM4P67936 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.34□□□□□ -1.39
TPM4P67936 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC6.34□□□□□ -1.39
TPM4P67936 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.34□□□□□ -1.39
TPM4P67936 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.34□□□□□ -1.39
TPM4P67936 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
TPM4P67936 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC6.34□□□□□ -1.39
TPM4P67936 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.34□□□□□ -1.4
TPM4P67936 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
TPM4P67936 AL442128.2-201ENST00000620246 1824 ntBASIC6.34□□□□□ -1.4
TPM4P67936 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
TPM4P67936 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TPM4P67936 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
TPM4P67936 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC6.33□□□□□ -1.4
TPM4P67936 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TPM4P67936 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.33□□□□□ -1.4
TPM4P67936 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC6.33□□□□□ -1.4
TPM4P67936 AC104964.3-201ENST00000606115 2860 ntBASIC6.33□□□□□ -1.4
TPM4P67936 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
TPM4P67936 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
TPM4P67936 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TPM4P67936 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC6.33□□□□□ -1.4
TPM4P67936 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
TPM4P67936 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TPM4P67936 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.33□□□□□ -1.4
TPM4P67936 MIR130A-201ENST00000385274 89 ntBASIC6.33□□□□□ -1.4
TPM4P67936 RN7SKP108-201ENST00000411367 328 ntBASIC6.33□□□□□ -1.4
TPM4P67936 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.33□□□□□ -1.4
TPM4P67936 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.33□□□□□ -1.4
TPM4P67936 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TPM4P67936 PPIAP32-201ENST00000449940 472 ntBASIC6.33□□□□□ -1.4
TPM4P67936 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.33□□□□□ -1.4
TPM4P67936 AC122714.1-201ENST00000502510 459 ntBASIC6.33□□□□□ -1.4
TPM4P67936 MAST4-IT1-201ENST00000514241 658 ntBASIC6.33□□□□□ -1.4
TPM4P67936 FTH1P11-201ENST00000517577 551 ntBASIC6.33□□□□□ -1.4
TPM4P67936 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.33□□□□□ -1.4
TPM4P67936 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TPM4P67936 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.33□□□□□ -1.4
TPM4P67936 AGGF1P7-201ENST00000562369 913 ntBASIC6.33□□□□□ -1.4
TPM4P67936 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TPM4P67936 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.33□□□□□ -1.4
TPM4P67936 MIR4260-201ENST00000583107 67 ntBASIC6.33□□□□□ -1.4
TPM4P67936 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.33□□□□□ -1.4
TPM4P67936 AC018809.2-201ENST00000602436 3823 ntBASIC6.33□□□□□ -1.4
TPM4P67936 RPL12P48-201ENST00000605620 304 ntBASIC6.33□□□□□ -1.4
TPM4P67936 AC010632.3-201ENST00000611377 369 ntBASIC6.33□□□□□ -1.4
TPM4P67936 AC090607.5-201ENST00000615692 224 ntBASIC6.33□□□□□ -1.4
TPM4P67936 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.33□□□□□ -1.4
TPM4P67936 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TPM4P67936 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
TPM4P67936 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC6.33□□□□□ -1.4
TPM4P67936 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.33□□□□□ -1.4
TPM4P67936 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
TPM4P67936 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
TPM4P67936 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
TPM4P67936 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TPM4P67936 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
TPM4P67936 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
TPM4P67936 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
TPM4P67936 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC6.33□□□□□ -1.4
TPM4P67936 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TPM4P67936 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
TPM4P67936 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
TPM4P67936 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
TPM4P67936 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TPM4P67936 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TPM4P67936 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
TPM4P67936 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
TPM4P67936 RNA5SP110-201ENST00000362638 115 ntBASIC6.32□□□□□ -1.4
TPM4P67936 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC6.32□□□□□ -1.4
TPM4P67936 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.32□□□□□ -1.4
TPM4P67936 AC092865.3-201ENST00000425390 1026 ntBASIC6.32□□□□□ -1.4
TPM4P67936 ARMC4P1-201ENST00000438905 707 ntBASIC6.32□□□□□ -1.4
TPM4P67936 AC073465.2-201ENST00000440938 498 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms