Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC8.96□□□□□ -0.98
CLIP1P30622 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC8.96□□□□□ -0.98
CLIP1P30622 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC8.96□□□□□ -0.98
CLIP1P30622 MIR4700-201ENST00000578311 74 ntBASIC8.96□□□□□ -0.98
CLIP1P30622 AC092944.2-201ENST00000605443 889 ntBASIC8.96□□□□□ -0.98
CLIP1P30622 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC8.96□□□□□ -0.98
CLIP1P30622 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
CLIP1P30622 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CLIP1P30622 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC8.95□□□□□ -0.98
CLIP1P30622 OFD1P17-201ENST00000437639 3018 ntBASIC8.95□□□□□ -0.98
CLIP1P30622 AC010168.2-201ENST00000562691 5428 ntBASIC8.95□□□□□ -0.98
CLIP1P30622 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
CLIP1P30622 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
CLIP1P30622 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC8.95□□□□□ -0.98
CLIP1P30622 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CLIP1P30622 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
CLIP1P30622 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC8.95□□□□□ -0.98
CLIP1P30622 NANOGP4-201ENST00000427230 913 ntBASIC8.95□□□□□ -0.98
CLIP1P30622 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC8.95□□□□□ -0.98
CLIP1P30622 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC8.95□□□□□ -0.98
CLIP1P30622 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC8.95□□□□□ -0.98
CLIP1P30622 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC8.95□□□□□ -0.98
CLIP1P30622 OR2AO1P-201ENST00000476497 403 ntBASIC8.95□□□□□ -0.98
CLIP1P30622 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC8.95□□□□□ -0.98
CLIP1P30622 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC8.95□□□□□ -0.98
CLIP1P30622 AL512329.2-201ENST00000607350 548 ntBASIC8.95□□□□□ -0.98
CLIP1P30622 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC8.95□□□□□ -0.98
CLIP1P30622 AL359513.1-201ENST00000614364 557 ntBASIC8.95□□□□□ -0.98
CLIP1P30622 MIR7155-201ENST00000615925 56 ntBASIC8.95□□□□□ -0.98
CLIP1P30622 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC8.95□□□□□ -0.98
CLIP1P30622 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC8.95□□□□□ -0.98
CLIP1P30622 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
CLIP1P30622 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC8.95□□□□□ -0.98
CLIP1P30622 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
CLIP1P30622 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
CLIP1P30622 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
CLIP1P30622 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC8.94□□□□□ -0.98
CLIP1P30622 AL592429.1-201ENST00000403909 1473 ntBASIC8.94□□□□□ -0.98
CLIP1P30622 AC006206.1-201ENST00000544842 3387 ntBASIC8.94□□□□□ -0.98
CLIP1P30622 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
CLIP1P30622 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC8.94□□□□□ -0.98
CLIP1P30622 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CLIP1P30622 AL451142.1-201ENST00000375867 775 ntBASIC8.94□□□□□ -0.98
CLIP1P30622 PRUNEP1-201ENST00000425846 705 ntBASIC8.94□□□□□ -0.98
CLIP1P30622 RPS17P5-201ENST00000498293 408 ntBASIC8.94□□□□□ -0.98
CLIP1P30622 HIGD1AP14-201ENST00000507617 282 ntBASIC8.94□□□□□ -0.98
CLIP1P30622 RN7SKP248-201ENST00000516278 305 ntBASIC8.94□□□□□ -0.98
CLIP1P30622 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC8.94□□□□□ -0.98
CLIP1P30622 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC8.94□□□□□ -0.98
CLIP1P30622 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
CLIP1P30622 AC079753.1-201ENST00000623243 3868 ntBASIC8.94□□□□□ -0.98
CLIP1P30622 EEF1A1P30-201ENST00000429708 1315 ntBASIC8.94□□□□□ -0.98
CLIP1P30622 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
CLIP1P30622 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC8.93□□□□□ -0.98
CLIP1P30622 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
CLIP1P30622 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CLIP1P30622 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC8.93□□□□□ -0.98
CLIP1P30622 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC8.93□□□□□ -0.98
CLIP1P30622 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CLIP1P30622 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CLIP1P30622 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
CLIP1P30622 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CLIP1P30622 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC8.93□□□□□ -0.98
CLIP1P30622 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC8.93□□□□□ -0.98
CLIP1P30622 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC8.93□□□□□ -0.98
CLIP1P30622 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CLIP1P30622 AL606490.1-201ENST00000452266 765 ntBASIC8.93□□□□□ -0.98
CLIP1P30622 MEMO1P4-201ENST00000453590 386 ntBASIC8.93□□□□□ -0.98
CLIP1P30622 RN7SL826P-201ENST00000479724 288 ntBASIC8.93□□□□□ -0.98
CLIP1P30622 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC8.93□□□□□ -0.98
CLIP1P30622 AC093763.2-201ENST00000505334 1223 ntBASIC8.93□□□□□ -0.98
CLIP1P30622 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CLIP1P30622 MIR6837-201ENST00000620884 64 ntBASIC8.93□□□□□ -0.98
CLIP1P30622 AL161912.4-201ENST00000623889 2468 ntBASIC8.93□□□□□ -0.98
CLIP1P30622 ALB-209ENST00000503124 1741 ntTSL 5 BASIC8.93□□□□□ -0.98
CLIP1P30622 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
CLIP1P30622 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CLIP1P30622 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC8.92□□□□□ -0.98
CLIP1P30622 CYP4Z2P-201ENST00000423332 1512 ntBASIC8.92□□□□□ -0.98
CLIP1P30622 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
CLIP1P30622 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
CLIP1P30622 ZNF812P-201ENST00000457674 1694 ntBASIC8.92□□□□□ -0.98
CLIP1P30622 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
CLIP1P30622 AC011933.2-201ENST00000578539 2790 ntBASIC8.92□□□□□ -0.98
CLIP1P30622 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC8.92□□□□□ -0.98
CLIP1P30622 U3.2-201ENST00000362981 210 ntBASIC8.92□□□□□ -0.98
CLIP1P30622 MRM2-202ENST00000407040 582 ntTSL 3 BASIC8.92□□□□□ -0.98
CLIP1P30622 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC8.92□□□□□ -0.98
CLIP1P30622 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC8.92□□□□□ -0.98
CLIP1P30622 GAPDHP58-201ENST00000438477 1006 ntBASIC8.92□□□□□ -0.98
CLIP1P30622 RPS26P41-201ENST00000450370 284 ntBASIC8.92□□□□□ -0.98
CLIP1P30622 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC8.92□□□□□ -0.98
CLIP1P30622 AC005532.2-201ENST00000467154 373 ntBASIC8.92□□□□□ -0.98
CLIP1P30622 COX6B1P2-201ENST00000489624 230 ntBASIC8.92□□□□□ -0.98
CLIP1P30622 CSNK1A1P3-201ENST00000504105 330 ntBASIC8.92□□□□□ -0.98
CLIP1P30622 AC024558.1-201ENST00000505008 528 ntBASIC8.92□□□□□ -0.98
CLIP1P30622 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC8.92□□□□□ -0.98
CLIP1P30622 AC118658.2-201ENST00000618697 459 ntBASIC8.92□□□□□ -0.98
CLIP1P30622 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC8.92□□□□□ -0.98
CLIP1P30622 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC8.92□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms