Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC087821.1-201ENST00000623639 567 ntBASIC5.59□□□□□ -1.51
PTPN6P29350 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.59□□□□□ -1.51
PTPN6P29350 MIR1910-201ENST00000636955 80 ntBASIC5.59□□□□□ -1.51
PTPN6P29350 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PTPN6P29350 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PTPN6P29350 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.59□□□□□ -1.51
PTPN6P29350 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.59□□□□□ -1.51
PTPN6P29350 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.59□□□□□ -1.52
PTPN6P29350 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
PTPN6P29350 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
PTPN6P29350 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PTPN6P29350 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PTPN6P29350 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PTPN6P29350 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.58□□□□□ -1.52
PTPN6P29350 AL158152.1-201ENST00000602652 1435 ntBASIC5.58□□□□□ -1.52
PTPN6P29350 AC004076.2-201ENST00000620532 3323 ntBASIC5.58□□□□□ -1.52
PTPN6P29350 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTPN6P29350 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
PTPN6P29350 RBMY1HP-201ENST00000382759 1389 ntBASIC5.58□□□□□ -1.52
PTPN6P29350 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTPN6P29350 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.58□□□□□ -1.52
PTPN6P29350 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PTPN6P29350 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
PTPN6P29350 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PTPN6P29350 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
PTPN6P29350 MIR130B-202ENST00000385018 82 ntBASIC5.58□□□□□ -1.52
PTPN6P29350 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PTPN6P29350 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.58□□□□□ -1.52
PTPN6P29350 RPL35AP3-201ENST00000414680 288 ntBASIC5.58□□□□□ -1.52
PTPN6P29350 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.58□□□□□ -1.52
PTPN6P29350 MGAT2P2-201ENST00000427194 797 ntBASIC5.58□□□□□ -1.52
PTPN6P29350 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.58□□□□□ -1.52
PTPN6P29350 AC242426.1-201ENST00000435270 960 ntBASIC5.58□□□□□ -1.52
PTPN6P29350 AC110602.1-201ENST00000437414 318 ntBASIC5.58□□□□□ -1.52
PTPN6P29350 AL663074.2-201ENST00000440621 479 ntBASIC5.58□□□□□ -1.52
PTPN6P29350 RPS10P18-201ENST00000442662 495 ntBASIC5.58□□□□□ -1.52
PTPN6P29350 FTLP8-201ENST00000446770 267 ntBASIC5.58□□□□□ -1.52
PTPN6P29350 PPIAP27-201ENST00000453800 265 ntBASIC5.58□□□□□ -1.52
PTPN6P29350 AC004129.2-201ENST00000457229 287 ntBASIC5.58□□□□□ -1.52
PTPN6P29350 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.58□□□□□ -1.52
PTPN6P29350 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.58□□□□□ -1.52
PTPN6P29350 LSM3P4-201ENST00000502948 309 ntBASIC5.58□□□□□ -1.52
PTPN6P29350 AC093815.1-201ENST00000508637 280 ntBASIC5.58□□□□□ -1.52
PTPN6P29350 LDHAP1-201ENST00000509421 992 ntBASIC5.58□□□□□ -1.52
PTPN6P29350 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.58□□□□□ -1.52
PTPN6P29350 MIR2117-201ENST00000516780 80 ntBASIC5.58□□□□□ -1.52
PTPN6P29350 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.58□□□□□ -1.52
PTPN6P29350 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.58□□□□□ -1.52
PTPN6P29350 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.58□□□□□ -1.52
PTPN6P29350 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.58□□□□□ -1.52
PTPN6P29350 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTPN6P29350 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.58□□□□□ -1.52
PTPN6P29350 AC079315.1-201ENST00000602952 623 ntBASIC5.58□□□□□ -1.52
PTPN6P29350 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.58□□□□□ -1.52
PTPN6P29350 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.58□□□□□ -1.52
PTPN6P29350 AP001153.1-201ENST00000641024 338 ntBASIC5.58□□□□□ -1.52
PTPN6P29350 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTPN6P29350 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTPN6P29350 MFSD8-239ENST00000641590 2479 ntBASIC5.58□□□□□ -1.52
PTPN6P29350 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTPN6P29350 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.58□□□□□ -1.52
PTPN6P29350 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
PTPN6P29350 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTPN6P29350 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.58□□□□□ -1.52
PTPN6P29350 LYARP1-201ENST00000436977 1501 ntBASIC5.58□□□□□ -1.52
PTPN6P29350 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
PTPN6P29350 Z83820.1-201ENST00000456978 1499 ntBASIC5.58□□□□□ -1.52
PTPN6P29350 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PTPN6P29350 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
PTPN6P29350 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PTPN6P29350 AC005005.4-201ENST00000623789 16698 ntBASIC5.57□□□□□ -1.52
PTPN6P29350 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PTPN6P29350 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PTPN6P29350 AC245100.2-201ENST00000454544 1679 ntBASIC5.57□□□□□ -1.52
PTPN6P29350 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PTPN6P29350 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PTPN6P29350 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PTPN6P29350 RN7SKP275-201ENST00000364626 301 ntBASIC5.57□□□□□ -1.52
PTPN6P29350 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.57□□□□□ -1.52
PTPN6P29350 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.57□□□□□ -1.52
PTPN6P29350 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.57□□□□□ -1.52
PTPN6P29350 BX276092.6-201ENST00000430476 250 ntBASIC5.57□□□□□ -1.52
PTPN6P29350 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.57□□□□□ -1.52
PTPN6P29350 FTLP19-201ENST00000433300 394 ntBASIC5.57□□□□□ -1.52
PTPN6P29350 AL358876.1-201ENST00000453364 1075 ntBASIC5.57□□□□□ -1.52
PTPN6P29350 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.57□□□□□ -1.52
PTPN6P29350 BX276092.8-201ENST00000455722 250 ntBASIC5.57□□□□□ -1.52
PTPN6P29350 AC023194.2-201ENST00000465398 406 ntBASIC5.57□□□□□ -1.52
PTPN6P29350 AC098847.1-201ENST00000473094 348 ntBASIC5.57□□□□□ -1.52
PTPN6P29350 AC079080.1-201ENST00000479841 822 ntBASIC5.57□□□□□ -1.52
PTPN6P29350 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PTPN6P29350 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.57□□□□□ -1.52
PTPN6P29350 RFPL4AP3-201ENST00000515267 345 ntBASIC5.57□□□□□ -1.52
PTPN6P29350 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.57□□□□□ -1.52
PTPN6P29350 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.57□□□□□ -1.52
PTPN6P29350 ZNF322P1-201ENST00000568013 1209 ntBASIC5.57□□□□□ -1.52
PTPN6P29350 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.57□□□□□ -1.52
PTPN6P29350 AL133481.2-203ENST00000607558 139 ntBASIC5.57□□□□□ -1.52
PTPN6P29350 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PTPN6P29350 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms