Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.86□□□□□ -1.63
COL8A2P25067 AC008115.3-201ENST00000614874 549 ntBASIC4.86□□□□□ -1.63
COL8A2P25067 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.86□□□□□ -1.63
COL8A2P25067 AL390318.1-201ENST00000624564 687 ntBASIC4.86□□□□□ -1.63
COL8A2P25067 AP001153.1-201ENST00000641024 338 ntBASIC4.86□□□□□ -1.63
COL8A2P25067 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL8A2P25067 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL8A2P25067 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC4.86□□□□□ -1.63
COL8A2P25067 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC4.86□□□□□ -1.63
COL8A2P25067 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL8A2P25067 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL8A2P25067 SRRM1P3-201ENST00000426911 2678 ntBASIC4.86□□□□□ -1.63
COL8A2P25067 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL8A2P25067 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL8A2P25067 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL8A2P25067 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL8A2P25067 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
COL8A2P25067 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL8A2P25067 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL8A2P25067 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
COL8A2P25067 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL8A2P25067 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COL8A2P25067 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC4.85□□□□□ -1.63
COL8A2P25067 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL8A2P25067 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL8A2P25067 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COL8A2P25067 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL8A2P25067 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC4.85□□□□□ -1.63
COL8A2P25067 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
COL8A2P25067 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COL8A2P25067 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COL8A2P25067 U3.25-201ENST00000391209 220 ntBASIC4.85□□□□□ -1.63
COL8A2P25067 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.85□□□□□ -1.63
COL8A2P25067 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.85□□□□□ -1.63
COL8A2P25067 BMS1P17-202ENST00000416720 316 ntBASIC4.85□□□□□ -1.63
COL8A2P25067 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.85□□□□□ -1.63
COL8A2P25067 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC4.85□□□□□ -1.63
COL8A2P25067 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC4.85□□□□□ -1.63
COL8A2P25067 KATNBL1P2-201ENST00000433311 835 ntBASIC4.85□□□□□ -1.63
COL8A2P25067 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC4.85□□□□□ -1.63
COL8A2P25067 AC073909.1-201ENST00000447112 999 ntBASIC4.85□□□□□ -1.63
COL8A2P25067 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
COL8A2P25067 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC4.85□□□□□ -1.63
COL8A2P25067 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC4.85□□□□□ -1.63
COL8A2P25067 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.85□□□□□ -1.63
COL8A2P25067 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.85□□□□□ -1.63
COL8A2P25067 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC4.85□□□□□ -1.63
COL8A2P25067 MRPS16P1-201ENST00000523462 412 ntBASIC4.85□□□□□ -1.63
COL8A2P25067 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC4.85□□□□□ -1.63
COL8A2P25067 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.85□□□□□ -1.63
COL8A2P25067 IGBP1P1-201ENST00000554337 1009 ntBASIC4.85□□□□□ -1.63
COL8A2P25067 AL049872.1-201ENST00000556323 322 ntBASIC4.85□□□□□ -1.63
COL8A2P25067 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC4.85□□□□□ -1.63
COL8A2P25067 AL049779.3-201ENST00000557141 606 ntBASIC4.85□□□□□ -1.63
COL8A2P25067 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC4.85□□□□□ -1.63
COL8A2P25067 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COL8A2P25067 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC4.85□□□□□ -1.63
COL8A2P25067 AC063977.5-201ENST00000601044 974 ntBASIC4.85□□□□□ -1.63
COL8A2P25067 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COL8A2P25067 AC022467.1-201ENST00000614738 749 ntBASIC4.85□□□□□ -1.63
COL8A2P25067 AL355974.3-201ENST00000617383 467 ntBASIC4.85□□□□□ -1.63
COL8A2P25067 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.85□□□□□ -1.63
COL8A2P25067 AC114876.1-201ENST00000490962 1366 ntBASIC4.85□□□□□ -1.63
COL8A2P25067 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL8A2P25067 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC4.85□□□□□ -1.63
COL8A2P25067 AP000432.2-201ENST00000624164 2048 ntBASIC4.85□□□□□ -1.63
COL8A2P25067 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC4.85□□□□□ -1.63
COL8A2P25067 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL8A2P25067 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL8A2P25067 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL8A2P25067 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COL8A2P25067 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL8A2P25067 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL8A2P25067 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC4.84□□□□□ -1.63
COL8A2P25067 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL8A2P25067 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL8A2P25067 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
COL8A2P25067 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
COL8A2P25067 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
COL8A2P25067 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC4.84□□□□□ -1.63
COL8A2P25067 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL8A2P25067 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL8A2P25067 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL8A2P25067 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL8A2P25067 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL8A2P25067 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL8A2P25067 YES1P1-201ENST00000418510 1628 ntBASIC4.84□□□□□ -1.63
COL8A2P25067 AC114786.1-201ENST00000512892 1415 ntBASIC4.84□□□□□ -1.63
COL8A2P25067 AC117409.1-201ENST00000470499 1310 ntBASIC4.84□□□□□ -1.63
COL8A2P25067 AL355834.1-201ENST00000556602 3965 ntBASIC4.84□□□□□ -1.63
COL8A2P25067 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
COL8A2P25067 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
COL8A2P25067 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.84□□□□□ -1.63
COL8A2P25067 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.84□□□□□ -1.63
COL8A2P25067 NIFKP3-201ENST00000417799 865 ntBASIC4.84□□□□□ -1.63
COL8A2P25067 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.84□□□□□ -1.63
COL8A2P25067 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC4.84□□□□□ -1.63
COL8A2P25067 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.84□□□□□ -1.63
COL8A2P25067 AL365220.1-201ENST00000432923 399 ntBASIC4.84□□□□□ -1.63
COL8A2P25067 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms