Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
SHANK2Q9UPX8 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
SHANK2Q9UPX8 AL365220.1-201ENST00000432923 399 ntBASIC8.42□□□□□ -1.06
SHANK2Q9UPX8 OR52B5P-201ENST00000435337 951 ntBASIC8.42□□□□□ -1.06
SHANK2Q9UPX8 NDUFAF4P3-201ENST00000456468 525 ntBASIC8.42□□□□□ -1.06
SHANK2Q9UPX8 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC8.42□□□□□ -1.06
SHANK2Q9UPX8 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC8.42□□□□□ -1.06
SHANK2Q9UPX8 MIR4330-201ENST00000579077 105 ntBASIC8.42□□□□□ -1.06
SHANK2Q9UPX8 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC8.42□□□□□ -1.06
SHANK2Q9UPX8 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC8.42□□□□□ -1.06
SHANK2Q9UPX8 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC8.42□□□□□ -1.06
SHANK2Q9UPX8 AC090527.3-201ENST00000619041 548 ntBASIC8.42□□□□□ -1.06
SHANK2Q9UPX8 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC8.42□□□□□ -1.06
SHANK2Q9UPX8 OR52B5P-202ENST00000641118 1110 ntBASIC8.42□□□□□ -1.06
SHANK2Q9UPX8 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SHANK2Q9UPX8 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SHANK2Q9UPX8 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SHANK2Q9UPX8 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC8.42□□□□□ -1.06
SHANK2Q9UPX8 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SHANK2Q9UPX8 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SHANK2Q9UPX8 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SHANK2Q9UPX8 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SHANK2Q9UPX8 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC8.41□□□□□ -1.06
SHANK2Q9UPX8 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SHANK2Q9UPX8 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SHANK2Q9UPX8 AC009962.1-201ENST00000567327 3813 ntBASIC8.41□□□□□ -1.06
SHANK2Q9UPX8 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
SHANK2Q9UPX8 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SHANK2Q9UPX8 ADIG-201ENST00000373348 430 ntTSL 2 BASIC8.41□□□□□ -1.06
SHANK2Q9UPX8 AC091390.1-201ENST00000433904 331 ntBASIC8.41□□□□□ -1.06
SHANK2Q9UPX8 AL035090.1-201ENST00000454835 332 ntBASIC8.41□□□□□ -1.06
SHANK2Q9UPX8 PGAM1P13-201ENST00000507497 754 ntBASIC8.41□□□□□ -1.06
SHANK2Q9UPX8 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC8.41□□□□□ -1.06
SHANK2Q9UPX8 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC8.41□□□□□ -1.06
SHANK2Q9UPX8 AL445528.2-201ENST00000620582 470 ntBASIC8.41□□□□□ -1.06
SHANK2Q9UPX8 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
SHANK2Q9UPX8 HSPD1P8-201ENST00000400121 1658 ntBASIC8.41□□□□□ -1.06
SHANK2Q9UPX8 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC8.41□□□□□ -1.06
SHANK2Q9UPX8 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
SHANK2Q9UPX8 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC8.41□□□□□ -1.06
SHANK2Q9UPX8 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
SHANK2Q9UPX8 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC8.41□□□□□ -1.06
SHANK2Q9UPX8 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
SHANK2Q9UPX8 PWAR1-201ENST00000624188 2414 ntBASIC8.4□□□□□ -1.06
SHANK2Q9UPX8 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
SHANK2Q9UPX8 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC8.4□□□□□ -1.06
SHANK2Q9UPX8 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
SHANK2Q9UPX8 RNU1-106P-201ENST00000384382 164 ntBASIC8.4□□□□□ -1.06
SHANK2Q9UPX8 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.06
SHANK2Q9UPX8 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC8.4□□□□□ -1.06
SHANK2Q9UPX8 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC8.4□□□□□ -1.06
SHANK2Q9UPX8 CEACAMP7-201ENST00000444105 496 ntBASIC8.4□□□□□ -1.06
SHANK2Q9UPX8 AC079080.1-201ENST00000479841 822 ntBASIC8.4□□□□□ -1.06
SHANK2Q9UPX8 RN7SL346P-201ENST00000491561 294 ntBASIC8.4□□□□□ -1.06
SHANK2Q9UPX8 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC8.4□□□□□ -1.06
SHANK2Q9UPX8 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC8.4□□□□□ -1.06
SHANK2Q9UPX8 RPL10P14-201ENST00000565265 298 ntBASIC8.4□□□□□ -1.06
SHANK2Q9UPX8 RBM22P1-201ENST00000578589 1214 ntBASIC8.4□□□□□ -1.06
SHANK2Q9UPX8 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC8.4□□□□□ -1.06
SHANK2Q9UPX8 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
SHANK2Q9UPX8 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC8.4□□□□□ -1.06
SHANK2Q9UPX8 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC8.4□□□□□ -1.06
SHANK2Q9UPX8 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC8.4□□□□□ -1.06
SHANK2Q9UPX8 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
SHANK2Q9UPX8 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
SHANK2Q9UPX8 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
SHANK2Q9UPX8 HYDIN2-203ENST00000614586 13885 ntBASIC8.4□□□□□ -1.06
SHANK2Q9UPX8 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
SHANK2Q9UPX8 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
SHANK2Q9UPX8 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
SHANK2Q9UPX8 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
SHANK2Q9UPX8 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
SHANK2Q9UPX8 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
SHANK2Q9UPX8 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
SHANK2Q9UPX8 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
SHANK2Q9UPX8 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
SHANK2Q9UPX8 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC8.4□□□□□ -1.07
SHANK2Q9UPX8 CAST-202ENST00000325674 3356 ntTSL 5 BASIC8.4□□□□□ -1.07
SHANK2Q9UPX8 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.07
SHANK2Q9UPX8 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
SHANK2Q9UPX8 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
SHANK2Q9UPX8 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
SHANK2Q9UPX8 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
SHANK2Q9UPX8 RNU1-77P-201ENST00000390868 162 ntBASIC8.39□□□□□ -1.07
SHANK2Q9UPX8 AL390879.1-201ENST00000439143 386 ntBASIC8.39□□□□□ -1.07
SHANK2Q9UPX8 AC006463.2-201ENST00000473326 348 ntBASIC8.39□□□□□ -1.07
SHANK2Q9UPX8 RN7SL447P-201ENST00000494711 245 ntBASIC8.39□□□□□ -1.07
SHANK2Q9UPX8 RPS17P5-201ENST00000498293 408 ntBASIC8.39□□□□□ -1.07
SHANK2Q9UPX8 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC8.39□□□□□ -1.07
SHANK2Q9UPX8 BLZF2P-201ENST00000553776 1130 ntBASIC8.39□□□□□ -1.07
SHANK2Q9UPX8 AL049779.2-201ENST00000553847 315 ntBASIC8.39□□□□□ -1.07
SHANK2Q9UPX8 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC8.39□□□□□ -1.07
SHANK2Q9UPX8 AL034408.1-201ENST00000637712 664 ntBASIC8.39□□□□□ -1.07
SHANK2Q9UPX8 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
SHANK2Q9UPX8 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC8.39□□□□□ -1.07
SHANK2Q9UPX8 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
SHANK2Q9UPX8 AC006206.1-201ENST00000544842 3387 ntBASIC8.39□□□□□ -1.07
SHANK2Q9UPX8 ABCA11P-202ENST00000504019 2110 ntBASIC8.39□□□□□ -1.07
SHANK2Q9UPX8 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
SHANK2Q9UPX8 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms