Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 RPL23AP40-201ENST00000487630 390 ntBASIC8.8□□□□□ -1
RIMBP3Q9UFD9 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC8.8□□□□□ -1
RIMBP3Q9UFD9 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC8.8□□□□□ -1
RIMBP3Q9UFD9 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC8.8□□□□□ -1
RIMBP3Q9UFD9 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC8.8□□□□□ -1
RIMBP3Q9UFD9 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
RIMBP3Q9UFD9 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC8.8□□□□□ -1
RIMBP3Q9UFD9 AC012254.5-201ENST00000623573 478 ntBASIC8.8□□□□□ -1
RIMBP3Q9UFD9 ITSN2-213ENST00000622089 5805 ntTSL 5 BASIC8.8□□□□□ -1
RIMBP3Q9UFD9 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
RIMBP3Q9UFD9 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
RIMBP3Q9UFD9 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
RIMBP3Q9UFD9 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
RIMBP3Q9UFD9 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC8.8□□□□□ -1
RIMBP3Q9UFD9 ERG-205ENST00000398910 4954 ntTSL 5 BASIC8.8□□□□□ -1
RIMBP3Q9UFD9 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC8.8□□□□□ -1
RIMBP3Q9UFD9 NAV2-213ENST00000533917 5084 ntTSL 2 BASIC8.8□□□□□ -1
RIMBP3Q9UFD9 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -1
RIMBP3Q9UFD9 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC8.8□□□□□ -1
RIMBP3Q9UFD9 AL080317.3-201ENST00000607434 4315 ntBASIC8.8□□□□□ -1
RIMBP3Q9UFD9 AL023806.3-201ENST00000638502 2704 ntBASIC8.8□□□□□ -1
RIMBP3Q9UFD9 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
RIMBP3Q9UFD9 RNA5SP455-201ENST00000365190 119 ntBASIC8.8□□□□□ -1
RIMBP3Q9UFD9 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC8.8□□□□□ -1
RIMBP3Q9UFD9 SCARNA13-201ENST00000516672 275 ntBASIC8.8□□□□□ -1
RIMBP3Q9UFD9 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC8.8□□□□□ -1
RIMBP3Q9UFD9 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC8.8□□□□□ -1
RIMBP3Q9UFD9 MIR3667-201ENST00000581025 74 ntBASIC8.8□□□□□ -1
RIMBP3Q9UFD9 AC005962.2-201ENST00000611427 652 ntBASIC8.8□□□□□ -1
RIMBP3Q9UFD9 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC8.8□□□□□ -1
RIMBP3Q9UFD9 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC8.79□□□□□ -1
RIMBP3Q9UFD9 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RIMBP3Q9UFD9 AC007996.1-201ENST00000620414 2821 ntBASIC8.79□□□□□ -1
RIMBP3Q9UFD9 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC8.79□□□□□ -1
RIMBP3Q9UFD9 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RIMBP3Q9UFD9 DENND2C-202ENST00000393276 5701 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
RIMBP3Q9UFD9 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
RIMBP3Q9UFD9 KIF13A-203ENST00000378814 6924 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
RIMBP3Q9UFD9 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
RIMBP3Q9UFD9 RPS3AP23-201ENST00000401762 784 ntBASIC8.79□□□□□ -1
RIMBP3Q9UFD9 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC8.79□□□□□ -1
RIMBP3Q9UFD9 GJA6P-201ENST00000415117 1042 ntBASIC8.79□□□□□ -1
RIMBP3Q9UFD9 CHEK2P3-201ENST00000416118 248 ntBASIC8.79□□□□□ -1
RIMBP3Q9UFD9 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC8.79□□□□□ -1
RIMBP3Q9UFD9 Z92846.1-201ENST00000456203 268 ntBASIC8.79□□□□□ -1
RIMBP3Q9UFD9 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
RIMBP3Q9UFD9 AC111000.3-201ENST00000508057 576 ntBASIC8.79□□□□□ -1
RIMBP3Q9UFD9 AC105384.2-201ENST00000508433 640 ntBASIC8.79□□□□□ -1
RIMBP3Q9UFD9 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC8.79□□□□□ -1
RIMBP3Q9UFD9 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
RIMBP3Q9UFD9 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC8.79□□□□□ -1
RIMBP3Q9UFD9 AC007494.1-201ENST00000562293 760 ntBASIC8.79□□□□□ -1
RIMBP3Q9UFD9 RN7SL690P-201ENST00000582087 240 ntBASIC8.79□□□□□ -1
RIMBP3Q9UFD9 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC8.79□□□□□ -1
RIMBP3Q9UFD9 AC090607.5-201ENST00000615692 224 ntBASIC8.79□□□□□ -1
RIMBP3Q9UFD9 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC8.79□□□□□ -1
RIMBP3Q9UFD9 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC8.79□□□□□ -1
RIMBP3Q9UFD9 AC074101.1-201ENST00000637861 241 ntBASIC8.79□□□□□ -1
RIMBP3Q9UFD9 AC116631.1-202ENST00000640984 683 ntBASIC8.79□□□□□ -1
RIMBP3Q9UFD9 AL589993.1-201ENST00000407450 2524 ntBASIC8.79□□□□□ -1
RIMBP3Q9UFD9 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC8.79□□□□□ -1
RIMBP3Q9UFD9 WDR19-201ENST00000399820 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RIMBP3Q9UFD9 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC8.78□□□□□ -1
RIMBP3Q9UFD9 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
RIMBP3Q9UFD9 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
RIMBP3Q9UFD9 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
RIMBP3Q9UFD9 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
RIMBP3Q9UFD9 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
RIMBP3Q9UFD9 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC8.78□□□□□ -1
RIMBP3Q9UFD9 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC8.78□□□□□ -1
RIMBP3Q9UFD9 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC8.78□□□□□ -1
RIMBP3Q9UFD9 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC8.78□□□□□ -1
RIMBP3Q9UFD9 RNU6-761P-201ENST00000384148 107 ntBASIC8.78□□□□□ -1
RIMBP3Q9UFD9 EIF4EBP2P3-201ENST00000403144 334 ntBASIC8.78□□□□□ -1
RIMBP3Q9UFD9 GPS2P1-201ENST00000411761 986 ntBASIC8.78□□□□□ -1
RIMBP3Q9UFD9 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC8.78□□□□□ -1
RIMBP3Q9UFD9 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC8.78□□□□□ -1
RIMBP3Q9UFD9 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC8.78□□□□□ -1
RIMBP3Q9UFD9 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC8.78□□□□□ -1
RIMBP3Q9UFD9 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC8.78□□□□□ -1
RIMBP3Q9UFD9 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC8.78□□□□□ -1
RIMBP3Q9UFD9 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC8.78□□□□□ -1
RIMBP3Q9UFD9 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC8.78□□□□□ -1
RIMBP3Q9UFD9 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC8.78□□□□□ -1
RIMBP3Q9UFD9 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
RIMBP3Q9UFD9 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC8.78□□□□□ -1
RIMBP3Q9UFD9 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
RIMBP3Q9UFD9 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC8.78□□□□□ -1
RIMBP3Q9UFD9 BMPR1A-201ENST00000372037 11255 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
RIMBP3Q9UFD9 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
RIMBP3Q9UFD9 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1
RIMBP3Q9UFD9 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC8.77□□□□□ -1.01
RIMBP3Q9UFD9 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
RIMBP3Q9UFD9 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
RIMBP3Q9UFD9 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
RIMBP3Q9UFD9 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC8.77□□□□□ -1.01
RIMBP3Q9UFD9 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC8.77□□□□□ -1.01
RIMBP3Q9UFD9 EIF2S2P2-201ENST00000447161 982 ntBASIC8.77□□□□□ -1.01
RIMBP3Q9UFD9 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC8.77□□□□□ -1.01
RIMBP3Q9UFD9 AC134349.2-201ENST00000535136 910 ntBASIC8.77□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms