Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
CHD7Q9P2D1 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CHD7Q9P2D1 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
CHD7Q9P2D1 RSL24D1P6-201ENST00000426934 401 ntBASIC5.71□□□□□ -1.49
CHD7Q9P2D1 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.71□□□□□ -1.49
CHD7Q9P2D1 RPS4XP20-201ENST00000505751 772 ntBASIC5.71□□□□□ -1.49
CHD7Q9P2D1 EIF3KP3-201ENST00000514461 639 ntBASIC5.71□□□□□ -1.49
CHD7Q9P2D1 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.71□□□□□ -1.49
CHD7Q9P2D1 OR5AM1P-201ENST00000532136 1032 ntBASIC5.71□□□□□ -1.49
CHD7Q9P2D1 AC009117.1-201ENST00000563948 554 ntBASIC5.71□□□□□ -1.49
CHD7Q9P2D1 MIR4277-201ENST00000578298 84 ntBASIC5.71□□□□□ -1.49
CHD7Q9P2D1 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
CHD7Q9P2D1 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CHD7Q9P2D1 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.71□□□□□ -1.49
CHD7Q9P2D1 SLIT3-202ENST00000404867 8903 ntTSL 5 BASIC5.71□□□□□ -1.5
CHD7Q9P2D1 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CHD7Q9P2D1 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.71□□□□□ -1.5
CHD7Q9P2D1 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
CHD7Q9P2D1 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC5.71□□□□□ -1.5
CHD7Q9P2D1 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC5.71□□□□□ -1.5
CHD7Q9P2D1 PRDM11-206ENST00000622142 10730 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CHD7Q9P2D1 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CHD7Q9P2D1 TRANK1-201ENST00000429976 10481 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CHD7Q9P2D1 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
CHD7Q9P2D1 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CHD7Q9P2D1 DBIP1-201ENST00000401435 260 ntBASIC5.71□□□□□ -1.5
CHD7Q9P2D1 AL354868.1-201ENST00000417077 482 ntBASIC5.71□□□□□ -1.5
CHD7Q9P2D1 CHIAP3-201ENST00000423668 1133 ntBASIC5.71□□□□□ -1.5
CHD7Q9P2D1 AL513533.1-201ENST00000453728 415 ntBASIC5.71□□□□□ -1.5
CHD7Q9P2D1 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.71□□□□□ -1.5
CHD7Q9P2D1 RN7SL481P-201ENST00000477764 299 ntBASIC5.71□□□□□ -1.5
CHD7Q9P2D1 HPRT1P1-201ENST00000509498 657 ntBASIC5.71□□□□□ -1.5
CHD7Q9P2D1 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.71□□□□□ -1.5
CHD7Q9P2D1 MIR3160-1-201ENST00000577972 85 ntBASIC5.71□□□□□ -1.5
CHD7Q9P2D1 AC011497.2-201ENST00000600255 639 ntBASIC5.71□□□□□ -1.5
CHD7Q9P2D1 SDK2-201ENST00000392650 10723 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CHD7Q9P2D1 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CHD7Q9P2D1 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.71□□□□□ -1.5
CHD7Q9P2D1 AL359955.1-201ENST00000455242 3275 ntBASIC5.71□□□□□ -1.5
CHD7Q9P2D1 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.71□□□□□ -1.5
CHD7Q9P2D1 OR4D9-202ENST00000641278 6063 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CHD7Q9P2D1 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC5.71□□□□□ -1.5
CHD7Q9P2D1 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC5.71□□□□□ -1.5
CHD7Q9P2D1 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
CHD7Q9P2D1 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC5.7□□□□□ -1.5
CHD7Q9P2D1 AL121886.1-201ENST00000358609 435 ntBASIC5.7□□□□□ -1.5
CHD7Q9P2D1 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.7□□□□□ -1.5
CHD7Q9P2D1 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.7□□□□□ -1.5
CHD7Q9P2D1 TRBV5-2-201ENST00000489095 273 ntBASIC5.7□□□□□ -1.5
CHD7Q9P2D1 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.7□□□□□ -1.5
CHD7Q9P2D1 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.7□□□□□ -1.5
CHD7Q9P2D1 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CHD7Q9P2D1 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.7□□□□□ -1.5
CHD7Q9P2D1 SNORD91A-202ENST00000609620 191 ntBASIC5.7□□□□□ -1.5
CHD7Q9P2D1 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CHD7Q9P2D1 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.7□□□□□ -1.5
CHD7Q9P2D1 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CHD7Q9P2D1 ADAMTS3-201ENST00000286657 6409 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CHD7Q9P2D1 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CHD7Q9P2D1 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC5.7□□□□□ -1.5
CHD7Q9P2D1 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CHD7Q9P2D1 ZNF791-202ENST00000446165 6412 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CHD7Q9P2D1 AP003119.3-201ENST00000566747 4192 ntBASIC5.7□□□□□ -1.5
CHD7Q9P2D1 FMNL3-201ENST00000335154 12634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CHD7Q9P2D1 OR8G1-202ENST00000641972 5055 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CHD7Q9P2D1 RBMY2TP-201ENST00000451162 947 ntBASIC5.7□□□□□ -1.5
CHD7Q9P2D1 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.7□□□□□ -1.5
CHD7Q9P2D1 CYCSP29-201ENST00000533731 318 ntBASIC5.7□□□□□ -1.5
CHD7Q9P2D1 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.7□□□□□ -1.5
CHD7Q9P2D1 AC137695.1-201ENST00000604126 489 ntBASIC5.7□□□□□ -1.5
CHD7Q9P2D1 AP005432.2-201ENST00000608162 586 ntBASIC5.7□□□□□ -1.5
CHD7Q9P2D1 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC5.7□□□□□ -1.5
CHD7Q9P2D1 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC5.7□□□□□ -1.5
CHD7Q9P2D1 THAP12P9-201ENST00000503971 2360 ntBASIC5.7□□□□□ -1.5
CHD7Q9P2D1 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CHD7Q9P2D1 BCOR-201ENST00000342274 6390 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
CHD7Q9P2D1 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC5.7□□□□□ -1.5
CHD7Q9P2D1 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CHD7Q9P2D1 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
CHD7Q9P2D1 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CHD7Q9P2D1 AC025569.1-202ENST00000548687 5903 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CHD7Q9P2D1 PAN2-221ENST00000610546 5301 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
CHD7Q9P2D1 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
CHD7Q9P2D1 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CHD7Q9P2D1 FAM3C2-201ENST00000312214 681 ntBASIC5.7□□□□□ -1.5
CHD7Q9P2D1 AL049693.1-201ENST00000402760 611 ntBASIC5.7□□□□□ -1.5
CHD7Q9P2D1 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC5.7□□□□□ -1.5
CHD7Q9P2D1 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.7□□□□□ -1.5
CHD7Q9P2D1 RPS27AP6-201ENST00000427962 448 ntBASIC5.7□□□□□ -1.5
CHD7Q9P2D1 AC007559.1-201ENST00000428736 355 ntBASIC5.7□□□□□ -1.5
CHD7Q9P2D1 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.7□□□□□ -1.5
CHD7Q9P2D1 AC091193.1-201ENST00000604640 448 ntBASIC5.7□□□□□ -1.5
CHD7Q9P2D1 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.7□□□□□ -1.5
CHD7Q9P2D1 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.7□□□□□ -1.5
CHD7Q9P2D1 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC5.7□□□□□ -1.5
CHD7Q9P2D1 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CHD7Q9P2D1 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.69□□□□□ -1.5
CHD7Q9P2D1 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CHD7Q9P2D1 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHD7Q9P2D1 ZNF37BP-202ENST00000452075 8637 ntTSL 2 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms