Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 RRN3-203ENST00000429751 2198 ntTSL 2 BASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 APP-209ENST00000440126 2846 ntTSL 2 BASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 FRG1BP-201ENST00000278882 761 ntBASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 NAP1L4P1-201ENST00000319092 1157 ntBASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 FRG1CP-201ENST00000358464 769 ntBASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 PDHA1-202ENST00000379804 709 ntTSL 2 BASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 RNU1-11P-201ENST00000383975 164 ntBASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 RN7SKP89-201ENST00000410774 242 ntBASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 AC074117.1-203ENST00000412749 399 ntTSL 3 BASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 AC009310.1-201ENST00000414414 451 ntBASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 RPA2P2-201ENST00000419698 796 ntBASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 AL445430.2-201ENST00000423149 686 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 ETF1P3-201ENST00000430422 1160 ntBASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 AC069154.1-201ENST00000432914 542 ntBASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 CR391992.1-201ENST00000438601 394 ntBASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 AC093166.3-201ENST00000448785 303 ntBASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 AC239798.1-201ENST00000449024 1176 ntBASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 AL591363.1-201ENST00000450091 483 ntBASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 RAD23BP3-201ENST00000454157 1152 ntBASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 RPL5P24-201ENST00000463742 885 ntBASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 PA2G4P4-201ENST00000473864 1182 ntBASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 AC079080.1-201ENST00000479841 822 ntBASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 LINC00960-202ENST00000492922 2126 ntTSL 2 BASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 NAF1-205ENST00000509434 385 ntTSL 3 BASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 AC016152.1-201ENST00000548344 521 ntTSL 3 BASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 DNM1P33-201ENST00000565222 270 ntBASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 CYP4A44P-201ENST00000569984 154 ntBASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 AC012146.2-201ENST00000576545 416 ntBASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 TTN-AS1-210ENST00000578746 677 ntTSL 3 BASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 GLUD1P2-201ENST00000583339 201 ntBASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 GLUD1P8-201ENST00000585063 203 ntBASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 LZTS1-204ENST00000616228 231 ntTSL 2 BASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 AC241585.4-201ENST00000640951 686 ntBASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 OPALIN-205ENST00000536387 3392 ntTSL 3 BASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 OR7E11P-202ENST00000642027 1491 ntBASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 SSR1-210ENST00000489567 1893 ntTSL 3 BASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
CUEDC1Q9NWM3 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC7.59□□□□□ -1.2
CUEDC1Q9NWM3 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.2
CUEDC1Q9NWM3 NACA-216ENST00000550952 2922 ntTSL 2 BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 MITF-203ENST00000328528 4680 ntTSL 5 BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 SLC17A3-203ENST00000361703 1543 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 FANCL-202ENST00000402135 1698 ntAPPRIS ALT1 TSL 2 BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 LINC00954-202ENST00000449086 2995 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 AC027279.1-201ENST00000568885 4284 ntBASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 SLC22A10-201ENST00000332793 2026 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 ZNF567-204ENST00000588311 2042 ntTSL 2 BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 PVALB-201ENST00000216200 595 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 RNU6-839P-201ENST00000363347 108 ntBASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 Y_RNA.142-201ENST00000363491 102 ntBASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 Y_RNA.279-201ENST00000364763 95 ntBASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 ST3GAL3-213ENST00000372365 673 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 IFNA12P-201ENST00000413147 571 ntBASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 MTCO3P12-201ENST00000416718 547 ntBASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 RNGTTP1-201ENST00000420965 728 ntBASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 AL513185.2-201ENST00000425543 193 ntBASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 AL137027.1-201ENST00000440358 444 ntTSL 2 BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 AL158214.1-201ENST00000444423 404 ntBASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 USP9YP12-201ENST00000450481 570 ntBASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 BZW1P1-201ENST00000454901 1240 ntBASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 MTND1P16-201ENST00000465177 898 ntBASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.58□□□□□ -1.2
CUEDC1Q9NWM3 PGBD4P1-201ENST00000473644 407 ntBASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms