Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 CLCN3P1-202ENST00000609203 1944 ntTSL 2 BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 CALML4-203ENST00000395465 4155 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 RAD21L1-203ENST00000409241 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 BRDT-204ENST00000394530 3207 ntTSL 2 BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 DPYSL2-201ENST00000311151 4603 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 DGKB-206ENST00000407950 3651 ntTSL 5 BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 AC068647.1-201ENST00000489539 2265 ntBASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 SPATA31D4-201ENST00000419782 4787 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 MAPK10-296ENST00000641283 2826 ntAPPRIS P2 BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 HSP90AB2P-201ENST00000507090 2176 ntBASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 TMEM217-201ENST00000336655 1546 ntAPPRIS P3 TSL 2 BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 MAPK6PS2-201ENST00000379571 2060 ntBASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 DGKG-203ENST00000382164 3152 ntTSL 5 BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 AC020904.2-202ENST00000614660 1401 ntBASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 ALB-219ENST00000621085 1418 ntTSL 5 BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 IL16-201ENST00000302987 3999 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 NEK2P4-201ENST00000425793 1329 ntBASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 TUBBP10-201ENST00000427668 1301 ntBASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 REG4-203ENST00000369401 2327 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 NRP1-207ENST00000374875 5407 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 GJB2-201ENST00000382844 2309 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 RCAN1-205ENST00000443408 2315 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 LINC02111-201ENST00000505158 2312 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 OR1D2-202ENST00000641064 4882 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC2.67□□□□□ -1.98
KRTAP4-3Q9BYR4 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 SMG1P1-202ENST00000309865 4223 ntBASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 ZFYVE26-201ENST00000347230 9675 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 VSIG1-202ENST00000415430 3236 ntAPPRIS ALT2 TSL 2 BASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 THAP12P1-201ENST00000398672 2203 ntBASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 AC008985.1-201ENST00000624169 2239 ntBASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 AC100810.3-201ENST00000633189 2240 ntBASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 LY75-CD302-201ENST00000504764 5650 ntAPPRIS P4 TSL 2 BASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 MYO1A-203ENST00000442789 3658 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 LINC01105-204ENST00000444416 2695 ntTSL 2 BASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 IPP-202ENST00000396478 3113 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 AL138713.1-201ENST00000624026 2130 ntBASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 C1QTNF7-204ENST00000429690 4464 ntAPPRIS P1 TSL 4 BASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 AC130360.2-201ENST00000533477 1556 ntBASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 ZNF415-213ENST00000597503 2469 ntTSL 2 BASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 EXOC4-201ENST00000253861 4185 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 LINC01721-201ENST00000457274 2376 ntTSL 2 BASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 SORL1-212ENST00000534286 3501 ntTSL 2 BASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 CUX1-203ENST00000360264 13762 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 AKT3-203ENST00000366539 5127 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 IL5RA-203ENST00000383846 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 EPN1-202ENST00000270460 16219 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 WDFY4-201ENST00000325239 10079 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 CASC15-203ENST00000605917 4461 ntBASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 TTLL4-201ENST00000258398 4730 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 Z97832.2-201ENST00000605896 4261 ntBASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 GBP4-201ENST00000355754 6127 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 AL078621.1-201ENST00000272567 768 ntBASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 OR1S2-201ENST00000302592 978 ntBASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 RNU4-23P-201ENST00000362839 140 ntBASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 RN7SKP63-201ENST00000363187 301 ntBASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 SNORD46-201ENST00000364043 104 ntBASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 Y_RNA.259-201ENST00000364619 101 ntBASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 SNORA20.1-201ENST00000364790 130 ntBASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 RNVU1-15-201ENST00000384476 165 ntBASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 RNU6-308P-201ENST00000390957 107 ntBASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 RN7SKP26-201ENST00000410247 293 ntBASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 RN7SKP221-201ENST00000410420 301 ntBASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 RN7SKP131-201ENST00000410698 301 ntBASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 RN7SKP121-201ENST00000410842 305 ntBASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 RPL21P108-201ENST00000413857 481 ntBASIC2.66□□□□□ -1.98
KRTAP4-3Q9BYR4 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms