Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 AP004607.3-201ENST00000530354 3915 ntBASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 THAP12P5-201ENST00000405864 2275 ntBASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 AP005432.1-201ENST00000580891 3485 ntBASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 SMC4P1-201ENST00000414479 527 ntBASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 AC023141.8-201ENST00000442554 208 ntBASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 OR52I1-201ENST00000450052 1050 ntBASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 SEPT14P1-201ENST00000458703 648 ntBASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 RPS7P6-201ENST00000485777 579 ntBASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 AC117500.1-201ENST00000497352 755 ntBASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 RPS17P5-201ENST00000498293 408 ntBASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 SNX18P25-201ENST00000510539 758 ntBASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 AC022616.2-201ENST00000523185 300 ntBASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 AC027026.1-201ENST00000532323 742 ntBASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 AC137627.1-201ENST00000545761 289 ntBASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 AC127381.1-201ENST00000555979 939 ntBASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 SMIM12P1-201ENST00000603004 274 ntBASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 AL139041.1-201ENST00000605480 610 ntBASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 RPSAP75-201ENST00000605848 301 ntBASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 RFPL4AP6-201ENST00000616792 846 ntBASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 AC117409.1-201ENST00000470499 1310 ntBASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 MTND5P12-201ENST00000502851 1449 ntBASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CCDC28BQ9BUN5 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 OR9K1P-201ENST00000326513 941 ntBASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 RNU1-134P-201ENST00000362935 165 ntBASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 RN7SKP286-201ENST00000410894 299 ntBASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 OR52N3P-201ENST00000413417 934 ntBASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 RBPJP7-201ENST00000442803 1447 ntBASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 LINC02210-201ENST00000444561 288 ntBASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 RBPJP5-201ENST00000449433 1447 ntBASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 NR1H5P-201ENST00000452683 1377 ntBASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 RPL12P30-201ENST00000488389 499 ntBASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 OSTC-204ENST00000512478 663 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 OR4A17P-201ENST00000526032 904 ntBASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 SETP1-201ENST00000556014 845 ntBASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 NMNAT1P5-201ENST00000559657 841 ntBASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 MTCO1P28-201ENST00000574177 1528 ntBASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 AC012254.3-201ENST00000591183 2117 ntBASIC5.61□□□□□ -1.51
CCDC28BQ9BUN5 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms