Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC6.16□□□□□ -1.42
RNF31Q96EP0 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC6.16□□□□□ -1.42
RNF31Q96EP0 RPL3P13-201ENST00000550415 216 ntBASIC6.16□□□□□ -1.42
RNF31Q96EP0 NDUFA5P11-201ENST00000567995 343 ntBASIC6.16□□□□□ -1.42
RNF31Q96EP0 MRPS21P8-201ENST00000569196 235 ntBASIC6.16□□□□□ -1.42
RNF31Q96EP0 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.16□□□□□ -1.42
RNF31Q96EP0 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.16□□□□□ -1.42
RNF31Q96EP0 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RNF31Q96EP0 AC079315.1-201ENST00000602952 623 ntBASIC6.16□□□□□ -1.42
RNF31Q96EP0 BUB1P1-201ENST00000603541 607 ntBASIC6.16□□□□□ -1.42
RNF31Q96EP0 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RNF31Q96EP0 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
RNF31Q96EP0 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
RNF31Q96EP0 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RNF31Q96EP0 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
RNF31Q96EP0 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.16□□□□□ -1.42
RNF31Q96EP0 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
RNF31Q96EP0 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RNF31Q96EP0 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RNF31Q96EP0 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
RNF31Q96EP0 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RNF31Q96EP0 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RNF31Q96EP0 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RNF31Q96EP0 AC005261.2-201ENST00000593427 4258 ntBASIC6.15□□□□□ -1.42
RNF31Q96EP0 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
RNF31Q96EP0 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RNF31Q96EP0 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
RNF31Q96EP0 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RNF31Q96EP0 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RNF31Q96EP0 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RNF31Q96EP0 RNU4-27P-201ENST00000410889 139 ntBASIC6.15□□□□□ -1.42
RNF31Q96EP0 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.15□□□□□ -1.42
RNF31Q96EP0 MTND4LP21-201ENST00000415303 295 ntBASIC6.15□□□□□ -1.42
RNF31Q96EP0 MTCO2P21-201ENST00000419780 677 ntBASIC6.15□□□□□ -1.42
RNF31Q96EP0 AL606495.1-201ENST00000422100 813 ntBASIC6.15□□□□□ -1.42
RNF31Q96EP0 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.15□□□□□ -1.42
RNF31Q96EP0 AL354707.3-201ENST00000427308 331 ntBASIC6.15□□□□□ -1.42
RNF31Q96EP0 AC079807.1-201ENST00000429993 481 ntBASIC6.15□□□□□ -1.42
RNF31Q96EP0 MTND2P5-201ENST00000432656 1006 ntBASIC6.15□□□□□ -1.42
RNF31Q96EP0 RPL12P11-201ENST00000439970 501 ntBASIC6.15□□□□□ -1.42
RNF31Q96EP0 H3F3BP1-201ENST00000440551 403 ntBASIC6.15□□□□□ -1.42
RNF31Q96EP0 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.15□□□□□ -1.42
RNF31Q96EP0 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC6.15□□□□□ -1.42
RNF31Q96EP0 CRYGGP-201ENST00000443337 145 ntBASIC6.15□□□□□ -1.42
RNF31Q96EP0 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC6.15□□□□□ -1.42
RNF31Q96EP0 RN7SL561P-201ENST00000488553 281 ntBASIC6.15□□□□□ -1.42
RNF31Q96EP0 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.15□□□□□ -1.42
RNF31Q96EP0 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.15□□□□□ -1.42
RNF31Q96EP0 AC111000.6-201ENST00000514471 709 ntBASIC6.15□□□□□ -1.42
RNF31Q96EP0 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC6.15□□□□□ -1.42
RNF31Q96EP0 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.15□□□□□ -1.42
RNF31Q96EP0 UBTFL10-201ENST00000528532 562 ntBASIC6.15□□□□□ -1.42
RNF31Q96EP0 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.15□□□□□ -1.42
RNF31Q96EP0 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.15□□□□□ -1.42
RNF31Q96EP0 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.15□□□□□ -1.42
RNF31Q96EP0 CSNK1A1P1-202ENST00000563423 981 ntBASIC6.15□□□□□ -1.42
RNF31Q96EP0 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
RNF31Q96EP0 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RNF31Q96EP0 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.15□□□□□ -1.42
RNF31Q96EP0 AL450336.1-201ENST00000605180 586 ntBASIC6.15□□□□□ -1.42
RNF31Q96EP0 AP005229.2-201ENST00000609980 697 ntBASIC6.15□□□□□ -1.42
RNF31Q96EP0 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.15□□□□□ -1.42
RNF31Q96EP0 AC022106.1-201ENST00000612834 766 ntBASIC6.15□□□□□ -1.42
RNF31Q96EP0 AC010333.3-201ENST00000615100 402 ntBASIC6.15□□□□□ -1.42
RNF31Q96EP0 MIR6729-201ENST00000618194 65 ntBASIC6.15□□□□□ -1.42
RNF31Q96EP0 AC021422.1-201ENST00000621212 473 ntBASIC6.15□□□□□ -1.42
RNF31Q96EP0 AC112694.2-201ENST00000623697 768 ntBASIC6.15□□□□□ -1.42
RNF31Q96EP0 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.15□□□□□ -1.42
RNF31Q96EP0 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RNF31Q96EP0 AC007159.1-201ENST00000566529 4706 ntBASIC6.15□□□□□ -1.42
RNF31Q96EP0 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.43
RNF31Q96EP0 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
RNF31Q96EP0 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
RNF31Q96EP0 NEK2P4-201ENST00000425793 1329 ntBASIC6.15□□□□□ -1.43
RNF31Q96EP0 EIF3EP1-201ENST00000433978 1316 ntBASIC6.15□□□□□ -1.43
RNF31Q96EP0 AL512310.3-201ENST00000547023 1335 ntBASIC6.15□□□□□ -1.43
RNF31Q96EP0 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.15□□□□□ -1.43
RNF31Q96EP0 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.15□□□□□ -1.43
RNF31Q96EP0 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
RNF31Q96EP0 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.15□□□□□ -1.43
RNF31Q96EP0 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.15□□□□□ -1.43
RNF31Q96EP0 SMG1P5-202ENST00000529428 4219 ntBASIC6.15□□□□□ -1.43
RNF31Q96EP0 SMG1P2-201ENST00000566127 4221 ntBASIC6.15□□□□□ -1.43
RNF31Q96EP0 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RNF31Q96EP0 MAPK10-357ENST00000641831 2858 ntBASIC6.15□□□□□ -1.43
RNF31Q96EP0 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RNF31Q96EP0 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
RNF31Q96EP0 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
RNF31Q96EP0 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.15□□□□□ -1.43
RNF31Q96EP0 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RNF31Q96EP0 PCF11-AS1-201ENST00000602322 1516 ntBASIC6.15□□□□□ -1.43
RNF31Q96EP0 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
RNF31Q96EP0 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
RNF31Q96EP0 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.14□□□□□ -1.43
RNF31Q96EP0 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.14□□□□□ -1.43
RNF31Q96EP0 SAGE3P-201ENST00000619800 1635 ntBASIC6.14□□□□□ -1.43
RNF31Q96EP0 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.14□□□□□ -1.43
RNF31Q96EP0 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.14□□□□□ -1.43
RNF31Q96EP0 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RNF31Q96EP0 CASC19-228ENST00000641414 1684 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms