Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 VIT-203ENST00000389975 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 IFNA7-201ENST00000239347 737 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 SPATA19-201ENST00000299140 861 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 RNA5SP463-201ENST00000363030 120 ntBASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 RNU6-1318P-201ENST00000365389 103 ntBASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 Y_RNA.459-201ENST00000384251 102 ntBASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 YWHAZP6-201ENST00000399764 738 ntBASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 PKMP3-201ENST00000405497 715 ntBASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 RNA5SP231-201ENST00000410496 138 ntBASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 AL590730.1-202ENST00000418875 321 ntTSL 2 BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 EEF1A1P27-201ENST00000429983 1135 ntBASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 RPS21P1-201ENST00000434479 247 ntBASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 TNR-IT1-201ENST00000455447 630 ntTSL 3 BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 AL035660.2-201ENST00000461248 556 ntTSL 2 BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 AC021660.1-201ENST00000465006 554 ntBASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 AC023598.1-201ENST00000472521 361 ntBASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 H3F3AP5-201ENST00000475267 429 ntBASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 AC074386.1-201ENST00000476560 767 ntBASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 GAPDHP39-201ENST00000481866 979 ntBASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 AC107956.2-201ENST00000496042 454 ntBASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 MTND6P2-201ENST00000512226 524 ntBASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 IGLVIV-59-201ENST00000520218 250 ntBASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 AP005597.4-201ENST00000526762 229 ntBASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 LINC02289-202ENST00000556781 861 ntTSL 3 BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 CYP4A44P-201ENST00000569984 154 ntBASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 RN7SL376P-201ENST00000578594 264 ntBASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 RN7SL473P-201ENST00000580341 299 ntBASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 RN7SL657P-201ENST00000582431 293 ntBASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 GLUD1P2-201ENST00000583339 201 ntBASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 GLUD1P8-201ENST00000585063 203 ntBASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 TAS2R6P-201ENST00000605022 826 ntBASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 AC016405.2-201ENST00000607393 312 ntBASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 AL133215.3-201ENST00000609801 448 ntBASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 AC124045.1-201ENST00000606008 1953 ntBASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 AC023818.2-201ENST00000623817 2304 ntBASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 ABCA11P-202ENST00000504019 2110 ntBASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 OR7E25P-202ENST00000641088 5937 ntBASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 SLC22A10-201ENST00000332793 2026 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 CTNNA2-217ENST00000540488 2792 ntTSL 5 BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 BTK-210ENST00000621635 2767 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 FANCL-203ENST00000403295 1576 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 ATP5BP1-201ENST00000411980 1574 ntBASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 AL445231.1-201ENST00000445523 1814 ntTSL 2 BASIC8.26□□□□□ -1.09
SCUBE3Q8IX30 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SCUBE3Q8IX30 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
SCUBE3Q8IX30 ZNF200-203ENST00000396871 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
SCUBE3Q8IX30 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SCUBE3Q8IX30 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SCUBE3Q8IX30 RGS7-202ENST00000366563 2206 ntTSL 5 BASIC8.26□□□□□ -1.09
SCUBE3Q8IX30 NPL-203ENST00000367553 2231 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SCUBE3Q8IX30 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SCUBE3Q8IX30 TTC3P1-201ENST00000399586 6081 ntBASIC8.26□□□□□ -1.09
SCUBE3Q8IX30 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC8.26□□□□□ -1.09
SCUBE3Q8IX30 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SCUBE3Q8IX30 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SCUBE3Q8IX30 MEF2C-221ENST00000514015 2772 ntTSL 5 BASIC8.26□□□□□ -1.09
SCUBE3Q8IX30 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC8.26□□□□□ -1.09
SCUBE3Q8IX30 AL390195.2-201ENST00000564771 2023 ntBASIC8.26□□□□□ -1.09
SCUBE3Q8IX30 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
SCUBE3Q8IX30 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SCUBE3Q8IX30 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SCUBE3Q8IX30 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SCUBE3Q8IX30 THEM5-201ENST00000368817 984 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SCUBE3Q8IX30 RNA5SP185-201ENST00000390963 114 ntBASIC8.26□□□□□ -1.09
SCUBE3Q8IX30 AL049693.1-201ENST00000402760 611 ntBASIC8.26□□□□□ -1.09
SCUBE3Q8IX30 HMGB3P20-201ENST00000417997 600 ntBASIC8.26□□□□□ -1.09
SCUBE3Q8IX30 RPS26P13-201ENST00000419030 330 ntBASIC8.26□□□□□ -1.09
SCUBE3Q8IX30 AKR1B15-201ENST00000423958 1035 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
SCUBE3Q8IX30 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC8.26□□□□□ -1.09
SCUBE3Q8IX30 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC8.26□□□□□ -1.09
SCUBE3Q8IX30 LSM3P3-201ENST00000436601 306 ntBASIC8.26□□□□□ -1.09
SCUBE3Q8IX30 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC8.26□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms