Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 MET-202ENST00000397752 6635 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
VARS2Q5ST30 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
VARS2Q5ST30 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC8.78□□□□□ -1
VARS2Q5ST30 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC8.78□□□□□ -1
VARS2Q5ST30 ARHGEF9-222ENST00000636048 5059 ntTSL 5 BASIC8.78□□□□□ -1
VARS2Q5ST30 POLR1B-203ENST00000409894 4457 ntTSL 1 (best) BASIC8.78□□□□□ -1
VARS2Q5ST30 ZSCAN31-219ENST00000611469 2669 ntTSL 4 BASIC8.77□□□□□ -1
VARS2Q5ST30 AL356289.3-201ENST00000640049 2669 ntBASIC8.77□□□□□ -1
VARS2Q5ST30 PECAM1-203ENST00000563924 6831 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
VARS2Q5ST30 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1
VARS2Q5ST30 TMPRSS11D-201ENST00000283916 2817 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
VARS2Q5ST30 RNASEH2B-AS1-209ENST00000631080 1707 ntTSL 5 BASIC8.77□□□□□ -1
VARS2Q5ST30 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
VARS2Q5ST30 AURKA-201ENST00000312783 2223 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
VARS2Q5ST30 PRICKLE2-205ENST00000638394 9956 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
VARS2Q5ST30 CABYR-202ENST00000399481 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
VARS2Q5ST30 MR1-205ENST00000434571 7479 ntTSL 5 BASIC8.77□□□□□ -1.01
VARS2Q5ST30 ARHGAP11A-202ENST00000543522 3152 ntTSL 2 BASIC8.77□□□□□ -1.01
VARS2Q5ST30 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
VARS2Q5ST30 SP140-201ENST00000343805 2910 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
VARS2Q5ST30 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
VARS2Q5ST30 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
VARS2Q5ST30 U8.3-201ENST00000363321 132 ntBASIC8.77□□□□□ -1.01
VARS2Q5ST30 RNU6-697P-201ENST00000363348 107 ntBASIC8.77□□□□□ -1.01
VARS2Q5ST30 SNORA71D-201ENST00000363484 134 ntBASIC8.77□□□□□ -1.01
VARS2Q5ST30 RNA5SP27-201ENST00000363839 119 ntBASIC8.77□□□□□ -1.01
VARS2Q5ST30 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
VARS2Q5ST30 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
VARS2Q5ST30 CSNK2B-202ENST00000375866 936 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
VARS2Q5ST30 RNU1-39P-201ENST00000383897 165 ntBASIC8.77□□□□□ -1.01
VARS2Q5ST30 RNA5SP231-201ENST00000410496 138 ntBASIC8.77□□□□□ -1.01
VARS2Q5ST30 AL022724.1-201ENST00000412132 554 ntTSL 3 BASIC8.77□□□□□ -1.01
VARS2Q5ST30 PROX1-AS1-201ENST00000413560 496 ntTSL 5 BASIC8.77□□□□□ -1.01
VARS2Q5ST30 AC008155.1-201ENST00000421078 329 ntBASIC8.77□□□□□ -1.01
VARS2Q5ST30 TEX41-204ENST00000423031 491 ntTSL 4 BASIC8.77□□□□□ -1.01
VARS2Q5ST30 RPL12P4-201ENST00000432629 497 ntBASIC8.77□□□□□ -1.01
VARS2Q5ST30 ZDHHC20P1-204ENST00000435787 423 ntBASIC8.77□□□□□ -1.01
VARS2Q5ST30 CYCSP11-201ENST00000436426 315 ntBASIC8.77□□□□□ -1.01
VARS2Q5ST30 RPSAP76-201ENST00000444599 853 ntBASIC8.77□□□□□ -1.01
VARS2Q5ST30 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC8.77□□□□□ -1.01
VARS2Q5ST30 OR7H1P-201ENST00000448965 922 ntBASIC8.77□□□□□ -1.01
VARS2Q5ST30 Y_RNA.635-201ENST00000459041 101 ntBASIC8.77□□□□□ -1.01
VARS2Q5ST30 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC8.77□□□□□ -1.01
VARS2Q5ST30 RPL12P32-201ENST00000484010 494 ntBASIC8.77□□□□□ -1.01
VARS2Q5ST30 OR9A3P-202ENST00000485185 878 ntBASIC8.77□□□□□ -1.01
VARS2Q5ST30 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC8.77□□□□□ -1.01
VARS2Q5ST30 RPL37-205ENST00000509877 637 ntTSL 5 BASIC8.77□□□□□ -1.01
VARS2Q5ST30 KRT18P54-201ENST00000513396 748 ntBASIC8.77□□□□□ -1.01
VARS2Q5ST30 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
VARS2Q5ST30 GZMB-205ENST00000526004 819 ntTSL 3 BASIC8.77□□□□□ -1.01
VARS2Q5ST30 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC8.77□□□□□ -1.01
VARS2Q5ST30 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC8.77□□□□□ -1.01
VARS2Q5ST30 AC092287.1-201ENST00000565782 463 ntTSL 3 BASIC8.77□□□□□ -1.01
VARS2Q5ST30 AC007861.1-201ENST00000576671 674 ntTSL 5 BASIC8.77□□□□□ -1.01
VARS2Q5ST30 MIR3714-201ENST00000579507 65 ntBASIC8.77□□□□□ -1.01
VARS2Q5ST30 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC8.77□□□□□ -1.01
VARS2Q5ST30 AC123788.2-201ENST00000612290 283 ntBASIC8.77□□□□□ -1.01
VARS2Q5ST30 AC143336.1-201ENST00000614164 836 ntBASIC8.77□□□□□ -1.01
VARS2Q5ST30 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC8.77□□□□□ -1.01
VARS2Q5ST30 AC233309.1-201ENST00000619522 751 ntBASIC8.77□□□□□ -1.01
VARS2Q5ST30 AC005790.1-201ENST00000619774 450 ntBASIC8.77□□□□□ -1.01
VARS2Q5ST30 AL162373.1-201ENST00000620433 407 ntBASIC8.77□□□□□ -1.01
VARS2Q5ST30 CHRDL1-203ENST00000394797 2413 ntAPPRIS P3 TSL 5 BASIC8.77□□□□□ -1.01
VARS2Q5ST30 BTF3L4-202ENST00000472944 2159 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
VARS2Q5ST30 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC8.77□□□□□ -1.01
VARS2Q5ST30 OR7E122P-202ENST00000641144 6171 ntBASIC8.77□□□□□ -1.01
VARS2Q5ST30 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
VARS2Q5ST30 ADGRF5-202ENST00000283296 5810 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
VARS2Q5ST30 SMC6-207ENST00000448223 5233 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
VARS2Q5ST30 CXCR6-201ENST00000304552 1962 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
VARS2Q5ST30 VPS8-204ENST00000424463 2359 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
VARS2Q5ST30 PAFAH2-201ENST00000374282 3581 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
VARS2Q5ST30 SAMMSON-210ENST00000641260 1308 ntBASIC8.77□□□□□ -1.01
VARS2Q5ST30 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
VARS2Q5ST30 HSPD1P5-201ENST00000511127 1720 ntBASIC8.77□□□□□ -1.01
VARS2Q5ST30 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
VARS2Q5ST30 GPD2-202ENST00000409125 2661 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
VARS2Q5ST30 LINC00410-201ENST00000419272 2018 ntTSL 2 BASIC8.76□□□□□ -1.01
VARS2Q5ST30 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
VARS2Q5ST30 CPA4-202ENST00000445470 2718 ntTSL 2 BASIC8.76□□□□□ -1.01
VARS2Q5ST30 NNT-AS1-204ENST00000513560 4769 ntTSL 2 BASIC8.76□□□□□ -1.01
VARS2Q5ST30 TFIP11-217ENST00000619735 3402 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
VARS2Q5ST30 CARF-201ENST00000320443 5209 ntTSL 2 BASIC8.76□□□□□ -1.01
VARS2Q5ST30 NEDD4L-214ENST00000586263 3347 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
VARS2Q5ST30 CALCOCO2-215ENST00000509507 1512 ntTSL 2 BASIC8.76□□□□□ -1.01
VARS2Q5ST30 AC026124.1-201ENST00000545709 3457 ntTSL 5 BASIC8.76□□□□□ -1.01
VARS2Q5ST30 CDY1B-202ENST00000382407 2227 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
VARS2Q5ST30 RBBP4-206ENST00000458695 1674 ntTSL 2 BASIC8.76□□□□□ -1.01
VARS2Q5ST30 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
VARS2Q5ST30 AL008638.2-201ENST00000453934 2383 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
VARS2Q5ST30 XRCC5-202ENST00000392133 3761 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
VARS2Q5ST30 CYP4A22-203ENST00000371891 2535 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
VARS2Q5ST30 NCOA4P2-201ENST00000340589 1813 ntBASIC8.76□□□□□ -1.01
VARS2Q5ST30 KIF23-203ENST00000395392 3357 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
VARS2Q5ST30 SORBS1-210ENST00000371246 6931 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
VARS2Q5ST30 SNORA69-201ENST00000383895 132 ntBASIC8.76□□□□□ -1.01
VARS2Q5ST30 RNU2-5P-201ENST00000410533 180 ntBASIC8.76□□□□□ -1.01
VARS2Q5ST30 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC8.76□□□□□ -1.01
VARS2Q5ST30 HMGB3P31-201ENST00000413333 595 ntBASIC8.76□□□□□ -1.01
VARS2Q5ST30 AC004160.2-201ENST00000425837 563 ntTSL 4 BASIC8.76□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms