Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
RFX7Q2KHR2 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.95□□□□□ -1.3
RFX7Q2KHR2 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.95□□□□□ -1.3
RFX7Q2KHR2 MIR1178-201ENST00000408396 91 ntBASIC6.95□□□□□ -1.3
RFX7Q2KHR2 MARK2P12-201ENST00000420129 585 ntBASIC6.95□□□□□ -1.3
RFX7Q2KHR2 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.95□□□□□ -1.3
RFX7Q2KHR2 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.95□□□□□ -1.3
RFX7Q2KHR2 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.95□□□□□ -1.3
RFX7Q2KHR2 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.95□□□□□ -1.3
RFX7Q2KHR2 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RFX7Q2KHR2 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC6.95□□□□□ -1.3
RFX7Q2KHR2 HMGB1P42-201ENST00000532126 553 ntBASIC6.95□□□□□ -1.3
RFX7Q2KHR2 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC6.95□□□□□ -1.3
RFX7Q2KHR2 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.95□□□□□ -1.3
RFX7Q2KHR2 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.95□□□□□ -1.3
RFX7Q2KHR2 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.95□□□□□ -1.3
RFX7Q2KHR2 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.95□□□□□ -1.3
RFX7Q2KHR2 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RFX7Q2KHR2 AC096996.1-201ENST00000563813 325 ntBASIC6.95□□□□□ -1.3
RFX7Q2KHR2 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.95□□□□□ -1.3
RFX7Q2KHR2 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.95□□□□□ -1.3
RFX7Q2KHR2 AP001357.1-201ENST00000586304 1053 ntBASIC6.95□□□□□ -1.3
RFX7Q2KHR2 FO393422.1-201ENST00000603908 708 ntBASIC6.95□□□□□ -1.3
RFX7Q2KHR2 AP000864.1-201ENST00000609424 650 ntBASIC6.95□□□□□ -1.3
RFX7Q2KHR2 AL352984.2-202ENST00000613699 155 ntBASIC6.95□□□□□ -1.3
RFX7Q2KHR2 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.95□□□□□ -1.3
RFX7Q2KHR2 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.95□□□□□ -1.3
RFX7Q2KHR2 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.95□□□□□ -1.3
RFX7Q2KHR2 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
RFX7Q2KHR2 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RFX7Q2KHR2 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.95□□□□□ -1.3
RFX7Q2KHR2 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RFX7Q2KHR2 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RFX7Q2KHR2 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.95□□□□□ -1.3
RFX7Q2KHR2 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
RFX7Q2KHR2 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.95□□□□□ -1.3
RFX7Q2KHR2 MAPK10-261ENST00000641050 3109 ntBASIC6.95□□□□□ -1.3
RFX7Q2KHR2 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RFX7Q2KHR2 AL669831.5-218ENST00000591702 1873 ntBASIC6.95□□□□□ -1.3
RFX7Q2KHR2 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RFX7Q2KHR2 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.95□□□□□ -1.3
RFX7Q2KHR2 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
RFX7Q2KHR2 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RFX7Q2KHR2 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
RFX7Q2KHR2 LINC02019-201ENST00000608605 2060 ntBASIC6.95□□□□□ -1.3
RFX7Q2KHR2 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RFX7Q2KHR2 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.95□□□□□ -1.3
RFX7Q2KHR2 RN7SKP278-201ENST00000410504 342 ntBASIC6.95□□□□□ -1.3
RFX7Q2KHR2 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.95□□□□□ -1.3
RFX7Q2KHR2 NIFKP3-201ENST00000417799 865 ntBASIC6.95□□□□□ -1.3
RFX7Q2KHR2 NENFP1-201ENST00000419476 466 ntBASIC6.95□□□□□ -1.3
RFX7Q2KHR2 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.95□□□□□ -1.3
RFX7Q2KHR2 AC021876.1-201ENST00000425959 359 ntBASIC6.95□□□□□ -1.3
RFX7Q2KHR2 Z84478.1-201ENST00000438230 1219 ntBASIC6.95□□□□□ -1.3
RFX7Q2KHR2 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.95□□□□□ -1.3
RFX7Q2KHR2 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.95□□□□□ -1.3
RFX7Q2KHR2 MIR4505-201ENST00000582238 73 ntBASIC6.95□□□□□ -1.3
RFX7Q2KHR2 AC093388.1-201ENST00000609166 430 ntBASIC6.95□□□□□ -1.3
RFX7Q2KHR2 MIR6719-201ENST00000622428 87 ntBASIC6.95□□□□□ -1.3
RFX7Q2KHR2 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RFX7Q2KHR2 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
RFX7Q2KHR2 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
RFX7Q2KHR2 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.94□□□□□ -1.3
RFX7Q2KHR2 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.94□□□□□ -1.3
RFX7Q2KHR2 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
RFX7Q2KHR2 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
RFX7Q2KHR2 SNX18P3-202ENST00000565670 1750 ntBASIC6.94□□□□□ -1.3
RFX7Q2KHR2 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.94□□□□□ -1.3
RFX7Q2KHR2 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.94□□□□□ -1.3
RFX7Q2KHR2 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.94□□□□□ -1.3
RFX7Q2KHR2 AL033543.1-201ENST00000623440 13454 ntBASIC6.94□□□□□ -1.3
RFX7Q2KHR2 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
RFX7Q2KHR2 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
RFX7Q2KHR2 AL159987.1-201ENST00000347911 293 ntBASIC6.94□□□□□ -1.3
RFX7Q2KHR2 HMGB3P24-201ENST00000433260 622 ntBASIC6.94□□□□□ -1.3
RFX7Q2KHR2 CYCSP51-201ENST00000443545 318 ntBASIC6.94□□□□□ -1.3
RFX7Q2KHR2 LRRC37A14P-201ENST00000452297 462 ntBASIC6.94□□□□□ -1.3
RFX7Q2KHR2 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.94□□□□□ -1.3
RFX7Q2KHR2 RPS17P5-201ENST00000498293 408 ntBASIC6.94□□□□□ -1.3
RFX7Q2KHR2 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.94□□□□□ -1.3
RFX7Q2KHR2 DUTP7-201ENST00000507982 486 ntBASIC6.94□□□□□ -1.3
RFX7Q2KHR2 SNORA43.3-201ENST00000517240 103 ntBASIC6.94□□□□□ -1.3
RFX7Q2KHR2 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.94□□□□□ -1.3
RFX7Q2KHR2 AC027026.1-201ENST00000532323 742 ntBASIC6.94□□□□□ -1.3
RFX7Q2KHR2 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.94□□□□□ -1.3
RFX7Q2KHR2 DPPA3P2-201ENST00000553589 478 ntBASIC6.94□□□□□ -1.3
RFX7Q2KHR2 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.94□□□□□ -1.3
RFX7Q2KHR2 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.94□□□□□ -1.3
RFX7Q2KHR2 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.94□□□□□ -1.3
RFX7Q2KHR2 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
RFX7Q2KHR2 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RFX7Q2KHR2 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
RFX7Q2KHR2 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
RFX7Q2KHR2 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
RFX7Q2KHR2 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RFX7Q2KHR2 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RFX7Q2KHR2 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
RFX7Q2KHR2 ABCA11P-202ENST00000504019 2110 ntBASIC6.93□□□□□ -1.3
RFX7Q2KHR2 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.93□□□□□ -1.3
RFX7Q2KHR2 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms