Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
EPHB3P54753 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC6.85□□□□□ -1.31
EPHB3P54753 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.85□□□□□ -1.31
EPHB3P54753 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
EPHB3P54753 AC011592.1-201ENST00000624647 3634 ntBASIC6.85□□□□□ -1.31
EPHB3P54753 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC6.85□□□□□ -1.31
EPHB3P54753 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
EPHB3P54753 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
EPHB3P54753 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
EPHB3P54753 RPL21P50-201ENST00000417698 477 ntBASIC6.85□□□□□ -1.31
EPHB3P54753 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC6.85□□□□□ -1.31
EPHB3P54753 OSTCP4-201ENST00000424397 449 ntBASIC6.85□□□□□ -1.31
EPHB3P54753 OSTCP5-201ENST00000425293 453 ntBASIC6.85□□□□□ -1.31
EPHB3P54753 OR5BE1P-201ENST00000425977 939 ntBASIC6.85□□□□□ -1.31
EPHB3P54753 Z68868.1-201ENST00000429048 544 ntBASIC6.85□□□□□ -1.31
EPHB3P54753 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.85□□□□□ -1.31
EPHB3P54753 RPL34P26-201ENST00000445636 354 ntBASIC6.85□□□□□ -1.31
EPHB3P54753 RPL7P55-201ENST00000450522 746 ntBASIC6.85□□□□□ -1.31
EPHB3P54753 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.85□□□□□ -1.31
EPHB3P54753 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC6.85□□□□□ -1.31
EPHB3P54753 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
EPHB3P54753 AC108734.3-201ENST00000481241 1165 ntBASIC6.85□□□□□ -1.31
EPHB3P54753 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.85□□□□□ -1.31
EPHB3P54753 MTCO2P32-201ENST00000514865 403 ntBASIC6.85□□□□□ -1.31
EPHB3P54753 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
EPHB3P54753 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.85□□□□□ -1.31
EPHB3P54753 AL133399.1-201ENST00000527476 298 ntBASIC6.85□□□□□ -1.31
EPHB3P54753 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC6.85□□□□□ -1.31
EPHB3P54753 NPIPB14P-203ENST00000532298 987 ntBASIC6.85□□□□□ -1.31
EPHB3P54753 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.85□□□□□ -1.31
EPHB3P54753 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
EPHB3P54753 AC008055.1-201ENST00000547032 609 ntBASIC6.85□□□□□ -1.31
EPHB3P54753 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
EPHB3P54753 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC6.85□□□□□ -1.31
EPHB3P54753 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC6.85□□□□□ -1.31
EPHB3P54753 MIR4502-201ENST00000580432 81 ntBASIC6.85□□□□□ -1.31
EPHB3P54753 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC6.85□□□□□ -1.31
EPHB3P54753 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC6.85□□□□□ -1.31
EPHB3P54753 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.85□□□□□ -1.31
EPHB3P54753 AC087468.1-201ENST00000604365 630 ntBASIC6.85□□□□□ -1.31
EPHB3P54753 AK6-205ENST00000618980 483 ntTSL 2 BASIC6.85□□□□□ -1.31
EPHB3P54753 AC025262.3-201ENST00000623666 360 ntBASIC6.85□□□□□ -1.31
EPHB3P54753 AL162377.2-201ENST00000624532 337 ntBASIC6.85□□□□□ -1.31
EPHB3P54753 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.85□□□□□ -1.31
EPHB3P54753 OR5BE1P-202ENST00000641168 1176 ntBASIC6.85□□□□□ -1.31
EPHB3P54753 AL391262.1-201ENST00000556558 1992 ntBASIC6.85□□□□□ -1.31
EPHB3P54753 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.85□□□□□ -1.31
EPHB3P54753 SPATA31B1P-201ENST00000434692 4016 ntBASIC6.85□□□□□ -1.31
EPHB3P54753 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.85□□□□□ -1.31
EPHB3P54753 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.85□□□□□ -1.31
EPHB3P54753 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
EPHB3P54753 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
EPHB3P54753 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.85□□□□□ -1.31
EPHB3P54753 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
EPHB3P54753 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
EPHB3P54753 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.85□□□□□ -1.31
EPHB3P54753 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
EPHB3P54753 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
EPHB3P54753 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC6.84□□□□□ -1.31
EPHB3P54753 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
EPHB3P54753 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
EPHB3P54753 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC6.84□□□□□ -1.31
EPHB3P54753 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
EPHB3P54753 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.84□□□□□ -1.31
EPHB3P54753 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.84□□□□□ -1.31
EPHB3P54753 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
EPHB3P54753 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
EPHB3P54753 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.84□□□□□ -1.31
EPHB3P54753 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
EPHB3P54753 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
EPHB3P54753 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
EPHB3P54753 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
EPHB3P54753 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
EPHB3P54753 Y_RNA.194-201ENST00000363985 102 ntBASIC6.84□□□□□ -1.31
EPHB3P54753 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
EPHB3P54753 RNU6-354P-201ENST00000383862 107 ntBASIC6.84□□□□□ -1.31
EPHB3P54753 RNU6-610P-201ENST00000384264 107 ntBASIC6.84□□□□□ -1.31
EPHB3P54753 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
EPHB3P54753 RNA5SP431-201ENST00000410312 120 ntBASIC6.84□□□□□ -1.31
EPHB3P54753 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
EPHB3P54753 RPL7AP14-201ENST00000424041 802 ntBASIC6.84□□□□□ -1.31
EPHB3P54753 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC6.84□□□□□ -1.31
EPHB3P54753 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC6.84□□□□□ -1.31
EPHB3P54753 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC6.84□□□□□ -1.31
EPHB3P54753 PSMD10P2-201ENST00000432890 672 ntBASIC6.84□□□□□ -1.31
EPHB3P54753 AC044797.1-201ENST00000445744 679 ntBASIC6.84□□□□□ -1.31
EPHB3P54753 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.84□□□□□ -1.31
EPHB3P54753 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
EPHB3P54753 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC6.84□□□□□ -1.31
EPHB3P54753 AC112518.2-201ENST00000508565 425 ntBASIC6.84□□□□□ -1.31
EPHB3P54753 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC6.84□□□□□ -1.31
EPHB3P54753 HMGN1P17-201ENST00000513734 295 ntBASIC6.84□□□□□ -1.31
EPHB3P54753 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC6.84□□□□□ -1.31
EPHB3P54753 AP003461.1-201ENST00000528866 78 ntBASIC6.84□□□□□ -1.31
EPHB3P54753 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.84□□□□□ -1.31
EPHB3P54753 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.84□□□□□ -1.31
EPHB3P54753 AC006512.2-201ENST00000543250 486 ntBASIC6.84□□□□□ -1.31
EPHB3P54753 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.84□□□□□ -1.31
EPHB3P54753 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC6.84□□□□□ -1.31
EPHB3P54753 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms