Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC006213.4-201ENST00000616184 634 ntBASIC6.48□□□□□ -1.37
NEK3P51956 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NEK3P51956 VPS35P1-201ENST00000563400 1518 ntBASIC6.48□□□□□ -1.37
NEK3P51956 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.48□□□□□ -1.37
NEK3P51956 AC125238.2-201ENST00000430003 1440 ntBASIC6.48□□□□□ -1.37
NEK3P51956 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NEK3P51956 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
NEK3P51956 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NEK3P51956 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
NEK3P51956 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.48□□□□□ -1.37
NEK3P51956 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NEK3P51956 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NEK3P51956 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
NEK3P51956 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NEK3P51956 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NEK3P51956 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.47□□□□□ -1.37
NEK3P51956 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NEK3P51956 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NEK3P51956 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.47□□□□□ -1.37
NEK3P51956 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
NEK3P51956 BIN2P1-201ENST00000504996 1530 ntBASIC6.47□□□□□ -1.37
NEK3P51956 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NEK3P51956 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.47□□□□□ -1.37
NEK3P51956 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
NEK3P51956 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
NEK3P51956 RBBP4P5-201ENST00000398583 1266 ntBASIC6.47□□□□□ -1.37
NEK3P51956 U3.43-201ENST00000410734 213 ntBASIC6.47□□□□□ -1.37
NEK3P51956 AL590806.1-201ENST00000415818 853 ntBASIC6.47□□□□□ -1.37
NEK3P51956 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.47□□□□□ -1.37
NEK3P51956 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.47□□□□□ -1.37
NEK3P51956 AL590399.4-201ENST00000436561 601 ntBASIC6.47□□□□□ -1.37
NEK3P51956 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.47□□□□□ -1.37
NEK3P51956 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.47□□□□□ -1.37
NEK3P51956 AC010240.2-201ENST00000445363 1205 ntBASIC6.47□□□□□ -1.37
NEK3P51956 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.47□□□□□ -1.37
NEK3P51956 VN1R38P-201ENST00000450265 887 ntBASIC6.47□□□□□ -1.37
NEK3P51956 AC103563.5-201ENST00000455643 364 ntBASIC6.47□□□□□ -1.37
NEK3P51956 MTND2P39-201ENST00000457230 764 ntBASIC6.47□□□□□ -1.37
NEK3P51956 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.47□□□□□ -1.37
NEK3P51956 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.47□□□□□ -1.37
NEK3P51956 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.47□□□□□ -1.37
NEK3P51956 AC091965.3-201ENST00000506236 208 ntBASIC6.47□□□□□ -1.37
NEK3P51956 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
NEK3P51956 AC018797.1-201ENST00000510791 255 ntBASIC6.47□□□□□ -1.37
NEK3P51956 RN7SKP70-201ENST00000516655 271 ntBASIC6.47□□□□□ -1.37
NEK3P51956 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.47□□□□□ -1.37
NEK3P51956 OR56A7P-201ENST00000524865 941 ntBASIC6.47□□□□□ -1.37
NEK3P51956 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.47□□□□□ -1.37
NEK3P51956 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC6.47□□□□□ -1.37
NEK3P51956 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.47□□□□□ -1.37
NEK3P51956 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC6.47□□□□□ -1.37
NEK3P51956 OR8X1P-201ENST00000534542 869 ntBASIC6.47□□□□□ -1.37
NEK3P51956 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC6.47□□□□□ -1.37
NEK3P51956 AL049870.4-201ENST00000555741 486 ntBASIC6.47□□□□□ -1.37
NEK3P51956 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC6.47□□□□□ -1.37
NEK3P51956 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.47□□□□□ -1.37
NEK3P51956 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NEK3P51956 AC005632.2-201ENST00000564271 828 ntBASIC6.47□□□□□ -1.37
NEK3P51956 OR1E3-201ENST00000575608 948 ntBASIC6.47□□□□□ -1.37
NEK3P51956 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.47□□□□□ -1.37
NEK3P51956 AC015911.5-201ENST00000587076 451 ntBASIC6.47□□□□□ -1.37
NEK3P51956 AC005776.1-201ENST00000603164 290 ntBASIC6.47□□□□□ -1.37
NEK3P51956 MTATP6P2-201ENST00000603319 678 ntBASIC6.47□□□□□ -1.37
NEK3P51956 SNORA74.4-201ENST00000607595 199 ntBASIC6.47□□□□□ -1.37
NEK3P51956 AL135999.3-201ENST00000610501 812 ntBASIC6.47□□□□□ -1.37
NEK3P51956 uc_338.31-201ENST00000615595 186 ntBASIC6.47□□□□□ -1.37
NEK3P51956 MIR6721-201ENST00000617181 87 ntBASIC6.47□□□□□ -1.37
NEK3P51956 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NEK3P51956 AP000943.4-201ENST00000622912 357 ntBASIC6.47□□□□□ -1.37
NEK3P51956 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC6.47□□□□□ -1.37
NEK3P51956 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.47□□□□□ -1.37
NEK3P51956 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.47□□□□□ -1.37
NEK3P51956 FRG1DP-201ENST00000635586 771 ntBASIC6.47□□□□□ -1.37
NEK3P51956 AC106858.1-201ENST00000637497 429 ntBASIC6.47□□□□□ -1.37
NEK3P51956 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NEK3P51956 CAP1P2-201ENST00000417455 1409 ntBASIC6.47□□□□□ -1.37
NEK3P51956 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.47□□□□□ -1.37
NEK3P51956 AC092070.2-203ENST00000598377 3644 ntBASIC6.47□□□□□ -1.37
NEK3P51956 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NEK3P51956 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
NEK3P51956 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
NEK3P51956 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
NEK3P51956 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
NEK3P51956 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
NEK3P51956 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.46□□□□□ -1.38
NEK3P51956 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.46□□□□□ -1.38
NEK3P51956 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
NEK3P51956 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
NEK3P51956 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
NEK3P51956 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.46□□□□□ -1.38
NEK3P51956 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.46□□□□□ -1.38
NEK3P51956 SNORD16-201ENST00000362803 99 ntBASIC6.46□□□□□ -1.38
NEK3P51956 RNA5SP279-201ENST00000365513 117 ntBASIC6.46□□□□□ -1.38
NEK3P51956 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
NEK3P51956 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.46□□□□□ -1.38
NEK3P51956 HMGB1P10-201ENST00000395823 563 ntBASIC6.46□□□□□ -1.38
NEK3P51956 YWHAZP6-201ENST00000399764 738 ntBASIC6.46□□□□□ -1.38
NEK3P51956 DHFRP2-201ENST00000414224 547 ntBASIC6.46□□□□□ -1.38
NEK3P51956 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.46□□□□□ -1.38
NEK3P51956 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms