Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AC017007.3-201ENST00000479865 435 ntBASIC6.48□□□□□ -1.37
GPC3P51654 CR383656.1-201ENST00000484916 377 ntBASIC6.48□□□□□ -1.37
GPC3P51654 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.48□□□□□ -1.37
GPC3P51654 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.48□□□□□ -1.37
GPC3P51654 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.48□□□□□ -1.37
GPC3P51654 CYCSP22-201ENST00000517555 339 ntBASIC6.48□□□□□ -1.37
GPC3P51654 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.48□□□□□ -1.37
GPC3P51654 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.48□□□□□ -1.37
GPC3P51654 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
GPC3P51654 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.48□□□□□ -1.37
GPC3P51654 GARSP1-201ENST00000570895 719 ntBASIC6.48□□□□□ -1.37
GPC3P51654 AC010547.6-201ENST00000571789 193 ntBASIC6.48□□□□□ -1.37
GPC3P51654 AC090286.3-201ENST00000573133 187 ntBASIC6.48□□□□□ -1.37
GPC3P51654 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.48□□□□□ -1.37
GPC3P51654 OR11H2-202ENST00000641517 1085 ntBASIC6.48□□□□□ -1.37
GPC3P51654 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
GPC3P51654 THAP12P9-201ENST00000503971 2360 ntBASIC6.48□□□□□ -1.37
GPC3P51654 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
GPC3P51654 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
GPC3P51654 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.48□□□□□ -1.37
GPC3P51654 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
GPC3P51654 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.48□□□□□ -1.37
GPC3P51654 AC022164.1-201ENST00000568767 2673 ntBASIC6.48□□□□□ -1.37
GPC3P51654 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
GPC3P51654 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
GPC3P51654 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
GPC3P51654 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
GPC3P51654 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
GPC3P51654 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.47□□□□□ -1.37
GPC3P51654 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
GPC3P51654 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
GPC3P51654 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
GPC3P51654 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
GPC3P51654 AC079355.1-201ENST00000421770 223 ntBASIC6.47□□□□□ -1.37
GPC3P51654 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.47□□□□□ -1.37
GPC3P51654 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.47□□□□□ -1.37
GPC3P51654 AC242426.1-201ENST00000435270 960 ntBASIC6.47□□□□□ -1.37
GPC3P51654 H3F3BP1-201ENST00000440551 403 ntBASIC6.47□□□□□ -1.37
GPC3P51654 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.47□□□□□ -1.37
GPC3P51654 RPS17P15-201ENST00000475609 349 ntBASIC6.47□□□□□ -1.37
GPC3P51654 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.47□□□□□ -1.37
GPC3P51654 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.47□□□□□ -1.37
GPC3P51654 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.47□□□□□ -1.37
GPC3P51654 OR4A6P-201ENST00000534364 970 ntBASIC6.47□□□□□ -1.37
GPC3P51654 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.47□□□□□ -1.37
GPC3P51654 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.47□□□□□ -1.37
GPC3P51654 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.47□□□□□ -1.37
GPC3P51654 MIR6768-201ENST00000610734 72 ntBASIC6.47□□□□□ -1.37
GPC3P51654 AC022919.1-201ENST00000624979 626 ntBASIC6.47□□□□□ -1.37
GPC3P51654 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.47□□□□□ -1.37
GPC3P51654 AP000550.3-201ENST00000637734 379 ntBASIC6.47□□□□□ -1.37
GPC3P51654 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.47□□□□□ -1.37
GPC3P51654 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
GPC3P51654 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
GPC3P51654 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
GPC3P51654 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.47□□□□□ -1.37
GPC3P51654 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.47□□□□□ -1.37
GPC3P51654 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
GPC3P51654 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
GPC3P51654 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.46□□□□□ -1.37
GPC3P51654 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
GPC3P51654 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
GPC3P51654 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
GPC3P51654 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
GPC3P51654 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
GPC3P51654 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
GPC3P51654 RNA5SP394-201ENST00000364216 119 ntBASIC6.46□□□□□ -1.38
GPC3P51654 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.46□□□□□ -1.38
GPC3P51654 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.46□□□□□ -1.38
GPC3P51654 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
GPC3P51654 AL121977.1-201ENST00000401636 979 ntBASIC6.46□□□□□ -1.38
GPC3P51654 HMGB1P20-201ENST00000402555 677 ntBASIC6.46□□□□□ -1.38
GPC3P51654 RPL34P3-201ENST00000421454 338 ntBASIC6.46□□□□□ -1.38
GPC3P51654 OR5W1P-201ENST00000423705 938 ntBASIC6.46□□□□□ -1.38
GPC3P51654 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.46□□□□□ -1.38
GPC3P51654 AL663074.2-201ENST00000440621 479 ntBASIC6.46□□□□□ -1.38
GPC3P51654 AL157777.1-201ENST00000468100 304 ntBASIC6.46□□□□□ -1.38
GPC3P51654 RPSAP37-201ENST00000470913 821 ntBASIC6.46□□□□□ -1.38
GPC3P51654 AC099521.1-201ENST00000482557 334 ntBASIC6.46□□□□□ -1.38
GPC3P51654 AC138409.2-202ENST00000507274 458 ntBASIC6.46□□□□□ -1.38
GPC3P51654 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.46□□□□□ -1.38
GPC3P51654 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.46□□□□□ -1.38
GPC3P51654 RN7SKP67-201ENST00000515905 235 ntBASIC6.46□□□□□ -1.38
GPC3P51654 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.46□□□□□ -1.38
GPC3P51654 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
GPC3P51654 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
GPC3P51654 HMGN2P47-201ENST00000559378 272 ntBASIC6.46□□□□□ -1.38
GPC3P51654 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.46□□□□□ -1.38
GPC3P51654 SNORD95-201ENST00000579879 68 ntBASIC6.46□□□□□ -1.38
GPC3P51654 AC125494.2-201ENST00000602431 657 ntBASIC6.46□□□□□ -1.38
GPC3P51654 AP000894.4-201ENST00000610185 483 ntBASIC6.46□□□□□ -1.38
GPC3P51654 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.46□□□□□ -1.38
GPC3P51654 RN7SL544P-201ENST00000617232 284 ntBASIC6.46□□□□□ -1.38
GPC3P51654 RN7SL763P-201ENST00000620922 284 ntBASIC6.46□□□□□ -1.38
GPC3P51654 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.46□□□□□ -1.38
GPC3P51654 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.46□□□□□ -1.38
GPC3P51654 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
GPC3P51654 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
GPC3P51654 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
GPC3P51654 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms