Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC010486.1-201ENST00000511793 424 ntBASIC7.36□□□□□ -1.23
RNF144AP50876 AC026412.2-201ENST00000512270 1075 ntBASIC7.36□□□□□ -1.23
RNF144AP50876 IGKV3D-31-201ENST00000519131 281 ntBASIC7.36□□□□□ -1.23
RNF144AP50876 AC008708.2-201ENST00000522956 1124 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RNF144AP50876 ACER3-213ENST00000533873 929 ntTSL 2 BASIC7.36□□□□□ -1.23
RNF144AP50876 MRPL40P1-201ENST00000542687 604 ntBASIC7.36□□□□□ -1.23
RNF144AP50876 SRSF5-206ENST00000554021 567 ntTSL 4 BASIC7.36□□□□□ -1.23
RNF144AP50876 AC005479.1-201ENST00000554629 451 ntBASIC7.36□□□□□ -1.23
RNF144AP50876 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC7.36□□□□□ -1.23
RNF144AP50876 AC116348.2-201ENST00000563751 577 ntTSL 4 BASIC7.36□□□□□ -1.23
RNF144AP50876 AC037471.2-201ENST00000564941 598 ntBASIC7.36□□□□□ -1.23
RNF144AP50876 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC7.36□□□□□ -1.23
RNF144AP50876 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC7.36□□□□□ -1.23
RNF144AP50876 AC011840.3-201ENST00000579378 280 ntTSL 3 BASIC7.36□□□□□ -1.23
RNF144AP50876 APOC1-202ENST00000588750 689 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF144AP50876 AC006504.6-201ENST00000590142 199 ntBASIC7.36□□□□□ -1.23
RNF144AP50876 AC068020.1-201ENST00000594215 661 ntBASIC7.36□□□□□ -1.23
RNF144AP50876 VN1R80P-201ENST00000597126 338 ntBASIC7.36□□□□□ -1.23
RNF144AP50876 AC130352.1-201ENST00000602979 661 ntBASIC7.36□□□□□ -1.23
RNF144AP50876 SUGT1P3-202ENST00000604259 383 ntBASIC7.36□□□□□ -1.23
RNF144AP50876 AC008738.6-201ENST00000604605 569 ntTSL 4 BASIC7.36□□□□□ -1.23
RNF144AP50876 BNIP3P4-201ENST00000604946 565 ntBASIC7.36□□□□□ -1.23
RNF144AP50876 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC7.36□□□□□ -1.23
RNF144AP50876 RN7SL82P-201ENST00000611435 237 ntBASIC7.36□□□□□ -1.23
RNF144AP50876 RN7SL628P-201ENST00000619139 237 ntBASIC7.36□□□□□ -1.23
RNF144AP50876 AC073488.5-201ENST00000631993 754 ntBASIC7.36□□□□□ -1.23
RNF144AP50876 AL158175.1-201ENST00000634327 1127 ntTSL 5 BASIC7.36□□□□□ -1.23
RNF144AP50876 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
RNF144AP50876 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF144AP50876 MSL3-201ENST00000312196 2345 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF144AP50876 CORIN-207ENST00000505909 3018 ntTSL 5 BASIC7.36□□□□□ -1.23
RNF144AP50876 ODF2-220ENST00000604420 3030 ntTSL 2 BASIC7.36□□□□□ -1.23
RNF144AP50876 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF144AP50876 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RNF144AP50876 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF144AP50876 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF144AP50876 AL136981.1-203ENST00000451452 3844 ntBASIC7.36□□□□□ -1.23
RNF144AP50876 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RNF144AP50876 CHAF1B-201ENST00000314103 4480 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF144AP50876 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC7.36□□□□□ -1.23
RNF144AP50876 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RNF144AP50876 ZNF334-206ENST00000625284 2495 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
RNF144AP50876 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF144AP50876 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RNF144AP50876 AC020904.2-202ENST00000614660 1401 ntBASIC7.35□□□□□ -1.23
RNF144AP50876 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RNF144AP50876 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC7.35□□□□□ -1.23
RNF144AP50876 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RNF144AP50876 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RNF144AP50876 GTF2H2-201ENST00000274400 4336 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RNF144AP50876 SULT1C2-202ENST00000326853 2828 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RNF144AP50876 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RNF144AP50876 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RNF144AP50876 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RNF144AP50876 DDX11L16-201ENST00000507418 1306 ntBASIC7.35□□□□□ -1.23
RNF144AP50876 ALDOB-201ENST00000374855 2451 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RNF144AP50876 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
RNF144AP50876 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RNF144AP50876 EPHA7-201ENST00000369297 1885 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RNF144AP50876 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RNF144AP50876 AC011447.7-201ENST00000624228 1590 ntBASIC7.35□□□□□ -1.23
RNF144AP50876 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
RNF144AP50876 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
RNF144AP50876 Y_RNA.132-201ENST00000363421 102 ntBASIC7.35□□□□□ -1.23
RNF144AP50876 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
RNF144AP50876 ST3GAL3-213ENST00000372365 673 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RNF144AP50876 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
RNF144AP50876 RNVU1-15-201ENST00000384476 165 ntBASIC7.35□□□□□ -1.23
RNF144AP50876 RNU6-1263P-201ENST00000384601 106 ntBASIC7.35□□□□□ -1.23
RNF144AP50876 SNORA75.4-201ENST00000391278 119 ntBASIC7.35□□□□□ -1.23
RNF144AP50876 EI24P3-201ENST00000399046 1062 ntBASIC7.35□□□□□ -1.23
RNF144AP50876 AC025750.1-201ENST00000399891 379 ntBASIC7.35□□□□□ -1.23
RNF144AP50876 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RNF144AP50876 AL356432.1-201ENST00000405809 419 ntBASIC7.35□□□□□ -1.23
RNF144AP50876 PRELID1P2-201ENST00000407805 396 ntBASIC7.35□□□□□ -1.23
RNF144AP50876 SNORD3J-201ENST00000408473 190 ntBASIC7.35□□□□□ -1.23
RNF144AP50876 RN7SKP59-201ENST00000410520 314 ntBASIC7.35□□□□□ -1.23
RNF144AP50876 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC7.35□□□□□ -1.23
RNF144AP50876 AL356387.1-201ENST00000426321 476 ntTSL 3 BASIC7.35□□□□□ -1.23
RNF144AP50876 GPM6BP2-201ENST00000432046 144 ntBASIC7.35□□□□□ -1.23
RNF144AP50876 FCF1P1-201ENST00000432690 571 ntBASIC7.35□□□□□ -1.23
RNF144AP50876 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.35□□□□□ -1.23
RNF144AP50876 OR52B5P-201ENST00000435337 951 ntBASIC7.35□□□□□ -1.23
RNF144AP50876 SDCBPP1-201ENST00000440192 890 ntBASIC7.35□□□□□ -1.23
RNF144AP50876 RABEPKP1-201ENST00000440529 1026 ntBASIC7.35□□□□□ -1.23
RNF144AP50876 CALM1P1-201ENST00000442082 433 ntBASIC7.35□□□□□ -1.23
RNF144AP50876 AL136454.1-201ENST00000443181 466 ntBASIC7.35□□□□□ -1.23
RNF144AP50876 GPM6BP1-201ENST00000446387 144 ntBASIC7.35□□□□□ -1.23
RNF144AP50876 AL157714.2-204ENST00000452283 973 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RNF144AP50876 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC7.35□□□□□ -1.23
RNF144AP50876 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC7.35□□□□□ -1.23
RNF144AP50876 AL121877.1-201ENST00000453704 622 ntBASIC7.35□□□□□ -1.23
RNF144AP50876 RPL38P1-201ENST00000460914 211 ntBASIC7.35□□□□□ -1.23
RNF144AP50876 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC7.35□□□□□ -1.23
RNF144AP50876 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC7.35□□□□□ -1.23
RNF144AP50876 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC7.35□□□□□ -1.23
RNF144AP50876 RPL39P36-201ENST00000490784 156 ntBASIC7.35□□□□□ -1.23
RNF144AP50876 SNX5P1-201ENST00000505757 1041 ntBASIC7.35□□□□□ -1.23
RNF144AP50876 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
RNF144AP50876 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms