Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC027279.4-201ENST00000624371 2072 ntBASIC6.7□□□□□ -1.34
NEDD4P46934 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
NEDD4P46934 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
NEDD4P46934 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.7□□□□□ -1.34
NEDD4P46934 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
NEDD4P46934 RNA5SP46-201ENST00000362370 120 ntBASIC6.7□□□□□ -1.34
NEDD4P46934 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.7□□□□□ -1.34
NEDD4P46934 RMRPP5-201ENST00000411156 267 ntBASIC6.7□□□□□ -1.34
NEDD4P46934 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.7□□□□□ -1.34
NEDD4P46934 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.7□□□□□ -1.34
NEDD4P46934 VN1R21P-201ENST00000426703 765 ntBASIC6.7□□□□□ -1.34
NEDD4P46934 FMO7P-201ENST00000436045 768 ntBASIC6.7□□□□□ -1.34
NEDD4P46934 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC6.7□□□□□ -1.34
NEDD4P46934 AC016724.1-201ENST00000453215 421 ntBASIC6.7□□□□□ -1.34
NEDD4P46934 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
NEDD4P46934 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.7□□□□□ -1.34
NEDD4P46934 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.7□□□□□ -1.34
NEDD4P46934 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.7□□□□□ -1.34
NEDD4P46934 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.7□□□□□ -1.34
NEDD4P46934 LDHBP3-201ENST00000514909 822 ntBASIC6.7□□□□□ -1.34
NEDD4P46934 AC021146.10-201ENST00000515628 706 ntBASIC6.7□□□□□ -1.34
NEDD4P46934 AC112191.2-201ENST00000522428 333 ntBASIC6.7□□□□□ -1.34
NEDD4P46934 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.7□□□□□ -1.34
NEDD4P46934 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.7□□□□□ -1.34
NEDD4P46934 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.7□□□□□ -1.34
NEDD4P46934 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.7□□□□□ -1.34
NEDD4P46934 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.7□□□□□ -1.34
NEDD4P46934 DHFRP1-201ENST00000579682 559 ntBASIC6.7□□□□□ -1.34
NEDD4P46934 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.7□□□□□ -1.34
NEDD4P46934 AC126175.1-201ENST00000617041 758 ntBASIC6.7□□□□□ -1.34
NEDD4P46934 AL390318.1-201ENST00000624564 687 ntBASIC6.7□□□□□ -1.34
NEDD4P46934 AC069542.2-201ENST00000624816 216 ntBASIC6.7□□□□□ -1.34
NEDD4P46934 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
NEDD4P46934 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
NEDD4P46934 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.69□□□□□ -1.34
NEDD4P46934 AL022323.4-201ENST00000623980 13120 ntBASIC6.69□□□□□ -1.34
NEDD4P46934 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NEDD4P46934 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
NEDD4P46934 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
NEDD4P46934 LINC02019-201ENST00000608605 2060 ntBASIC6.69□□□□□ -1.34
NEDD4P46934 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.69□□□□□ -1.34
NEDD4P46934 AL161912.4-201ENST00000623889 2468 ntBASIC6.69□□□□□ -1.34
NEDD4P46934 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NEDD4P46934 KARSP1-201ENST00000451871 1752 ntBASIC6.69□□□□□ -1.34
NEDD4P46934 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NEDD4P46934 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.69□□□□□ -1.34
NEDD4P46934 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
NEDD4P46934 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
NEDD4P46934 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
NEDD4P46934 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NEDD4P46934 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NEDD4P46934 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.69□□□□□ -1.34
NEDD4P46934 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NEDD4P46934 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
NEDD4P46934 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NEDD4P46934 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NEDD4P46934 RN7SKP69-201ENST00000365390 305 ntBASIC6.69□□□□□ -1.34
NEDD4P46934 RN7SKP286-201ENST00000410894 299 ntBASIC6.69□□□□□ -1.34
NEDD4P46934 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.69□□□□□ -1.34
NEDD4P46934 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.69□□□□□ -1.34
NEDD4P46934 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.69□□□□□ -1.34
NEDD4P46934 AC005297.1-201ENST00000444765 862 ntBASIC6.69□□□□□ -1.34
NEDD4P46934 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.69□□□□□ -1.34
NEDD4P46934 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.69□□□□□ -1.34
NEDD4P46934 NXT1P1-201ENST00000458481 316 ntBASIC6.69□□□□□ -1.34
NEDD4P46934 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.69□□□□□ -1.34
NEDD4P46934 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.69□□□□□ -1.34
NEDD4P46934 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.69□□□□□ -1.34
NEDD4P46934 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.69□□□□□ -1.34
NEDD4P46934 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.69□□□□□ -1.34
NEDD4P46934 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.69□□□□□ -1.34
NEDD4P46934 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.69□□□□□ -1.34
NEDD4P46934 AC090607.5-201ENST00000615692 224 ntBASIC6.69□□□□□ -1.34
NEDD4P46934 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.69□□□□□ -1.34
NEDD4P46934 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NEDD4P46934 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NEDD4P46934 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NEDD4P46934 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.69□□□□□ -1.34
NEDD4P46934 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NEDD4P46934 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NEDD4P46934 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NEDD4P46934 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.68□□□□□ -1.34
NEDD4P46934 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
NEDD4P46934 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.68□□□□□ -1.34
NEDD4P46934 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NEDD4P46934 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
NEDD4P46934 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
NEDD4P46934 YES1P1-201ENST00000418510 1628 ntBASIC6.68□□□□□ -1.34
NEDD4P46934 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NEDD4P46934 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
NEDD4P46934 AC114786.1-201ENST00000512892 1415 ntBASIC6.68□□□□□ -1.34
NEDD4P46934 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
NEDD4P46934 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
NEDD4P46934 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.68□□□□□ -1.34
NEDD4P46934 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NEDD4P46934 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.68□□□□□ -1.34
NEDD4P46934 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NEDD4P46934 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.68□□□□□ -1.34
NEDD4P46934 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.68□□□□□ -1.34
NEDD4P46934 AL355488.2-201ENST00000609909 2850 ntBASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms