Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 AP004607.3-201ENST00000530354 3915 ntBASIC6.34□□□□□ -1.4
UBE4BO95155 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.34□□□□□ -1.4
UBE4BO95155 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.33□□□□□ -1.4
UBE4BO95155 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
UBE4BO95155 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
UBE4BO95155 AC140479.2-201ENST00000421567 3130 ntBASIC6.33□□□□□ -1.4
UBE4BO95155 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
UBE4BO95155 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
UBE4BO95155 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
UBE4BO95155 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
UBE4BO95155 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
UBE4BO95155 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
UBE4BO95155 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.33□□□□□ -1.4
UBE4BO95155 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.33□□□□□ -1.4
UBE4BO95155 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
UBE4BO95155 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
UBE4BO95155 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.33□□□□□ -1.4
UBE4BO95155 AC013410.1-201ENST00000436223 1232 ntBASIC6.33□□□□□ -1.4
UBE4BO95155 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.33□□□□□ -1.4
UBE4BO95155 RPS23P2-201ENST00000463671 415 ntBASIC6.33□□□□□ -1.4
UBE4BO95155 AC139365.2-201ENST00000517972 253 ntBASIC6.33□□□□□ -1.4
UBE4BO95155 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
UBE4BO95155 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.33□□□□□ -1.4
UBE4BO95155 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.33□□□□□ -1.4
UBE4BO95155 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.33□□□□□ -1.4
UBE4BO95155 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.33□□□□□ -1.4
UBE4BO95155 AC009237.12-201ENST00000604755 742 ntBASIC6.33□□□□□ -1.4
UBE4BO95155 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.33□□□□□ -1.4
UBE4BO95155 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
UBE4BO95155 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
UBE4BO95155 MSL3P1-202ENST00000440028 1468 ntBASIC6.33□□□□□ -1.4
UBE4BO95155 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
UBE4BO95155 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
UBE4BO95155 AC006600.2-201ENST00000624834 2506 ntBASIC6.33□□□□□ -1.4
UBE4BO95155 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
UBE4BO95155 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
UBE4BO95155 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
UBE4BO95155 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
UBE4BO95155 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.32□□□□□ -1.4
UBE4BO95155 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
UBE4BO95155 LINC01963-201ENST00000562038 3148 ntBASIC6.32□□□□□ -1.4
UBE4BO95155 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
UBE4BO95155 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.32□□□□□ -1.4
UBE4BO95155 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.32□□□□□ -1.4
UBE4BO95155 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
UBE4BO95155 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
UBE4BO95155 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
UBE4BO95155 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
UBE4BO95155 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
UBE4BO95155 U3.10-201ENST00000364459 214 ntBASIC6.32□□□□□ -1.4
UBE4BO95155 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.32□□□□□ -1.4
UBE4BO95155 RNU1-136P-201ENST00000384181 164 ntBASIC6.32□□□□□ -1.4
UBE4BO95155 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
UBE4BO95155 NIFKP3-201ENST00000417799 865 ntBASIC6.32□□□□□ -1.4
UBE4BO95155 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
UBE4BO95155 GAPDHP48-201ENST00000436626 961 ntBASIC6.32□□□□□ -1.4
UBE4BO95155 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.32□□□□□ -1.4
UBE4BO95155 AL512637.1-201ENST00000439523 1231 ntBASIC6.32□□□□□ -1.4
UBE4BO95155 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.32□□□□□ -1.4
UBE4BO95155 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.32□□□□□ -1.4
UBE4BO95155 RPS3AP15-201ENST00000483874 781 ntBASIC6.32□□□□□ -1.4
UBE4BO95155 AC073610.1-201ENST00000489971 396 ntBASIC6.32□□□□□ -1.4
UBE4BO95155 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.32□□□□□ -1.4
UBE4BO95155 AC114781.3-201ENST00000512083 142 ntBASIC6.32□□□□□ -1.4
UBE4BO95155 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.32□□□□□ -1.4
UBE4BO95155 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.32□□□□□ -1.4
UBE4BO95155 DPPA3P2-202ENST00000557188 1219 ntBASIC6.32□□□□□ -1.4
UBE4BO95155 AC096996.1-201ENST00000563813 325 ntBASIC6.32□□□□□ -1.4
UBE4BO95155 AC093524.1-201ENST00000564266 1094 ntBASIC6.32□□□□□ -1.4
UBE4BO95155 AC092121.1-201ENST00000569452 202 ntBASIC6.32□□□□□ -1.4
UBE4BO95155 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.32□□□□□ -1.4
UBE4BO95155 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.32□□□□□ -1.4
UBE4BO95155 AL138895.2-201ENST00000603019 178 ntBASIC6.32□□□□□ -1.4
UBE4BO95155 MIR6729-201ENST00000618194 65 ntBASIC6.32□□□□□ -1.4
UBE4BO95155 IPO5-229ENST00000631030 192 ntTSL 5 BASIC6.32□□□□□ -1.4
UBE4BO95155 AC129915.3-201ENST00000634128 948 ntBASIC6.32□□□□□ -1.4
UBE4BO95155 OR8G3P-202ENST00000641572 1255 ntBASIC6.32□□□□□ -1.4
UBE4BO95155 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.32□□□□□ -1.4
UBE4BO95155 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
UBE4BO95155 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
UBE4BO95155 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
UBE4BO95155 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
UBE4BO95155 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
UBE4BO95155 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
UBE4BO95155 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
UBE4BO95155 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
UBE4BO95155 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.31□□□□□ -1.4
UBE4BO95155 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.31□□□□□ -1.4
UBE4BO95155 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.31□□□□□ -1.4
UBE4BO95155 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.31□□□□□ -1.4
UBE4BO95155 BX323845.3-201ENST00000428215 527 ntBASIC6.31□□□□□ -1.4
UBE4BO95155 AL022331.1-201ENST00000429025 477 ntBASIC6.31□□□□□ -1.4
UBE4BO95155 DNAJA1P5-201ENST00000440278 943 ntBASIC6.31□□□□□ -1.4
UBE4BO95155 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.31□□□□□ -1.4
UBE4BO95155 HLA-DPA3-207ENST00000454398 229 ntBASIC6.31□□□□□ -1.4
UBE4BO95155 RPS7P6-201ENST00000485777 579 ntBASIC6.31□□□□□ -1.4
UBE4BO95155 OR7E157P-201ENST00000494376 911 ntBASIC6.31□□□□□ -1.4
UBE4BO95155 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.31□□□□□ -1.4
UBE4BO95155 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.31□□□□□ -1.4
UBE4BO95155 SNORA70.20-201ENST00000516848 126 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms