Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AL627171.1-201ENST00000618845 1308 ntBASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 AC027279.4-201ENST00000624371 2072 ntBASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 AC132825.1-201ENST00000463573 2247 ntBASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 SHQ1P1-201ENST00000437111 1544 ntBASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 BIN2P1-201ENST00000504996 1530 ntBASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 BX664727.1-201ENST00000416024 466 ntBASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 OR13Z1P-201ENST00000416141 834 ntBASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 AL360013.1-201ENST00000419031 858 ntBASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 NME1P1-201ENST00000420914 382 ntBASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 OR6R1P-201ENST00000431838 940 ntBASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 AC092967.1-201ENST00000449016 481 ntBASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 RPS26P41-201ENST00000450370 284 ntBASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 RN7SL643P-201ENST00000471845 291 ntBASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 AC093664.1-201ENST00000511779 289 ntBASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 RNU2-45P-201ENST00000516068 187 ntBASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 IGHV4-55-201ENST00000520889 368 ntBASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 BUD31P1-201ENST00000521828 359 ntBASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 AL133399.1-201ENST00000527476 298 ntBASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 AC124891.1-201ENST00000536322 519 ntBASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 AL121579.2-201ENST00000555466 590 ntBASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 MIR212-201ENST00000586026 110 ntBASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 MTCO2P22-201ENST00000603246 681 ntBASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 AC073046.2-201ENST00000604756 527 ntBASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 AC067838.1-201ENST00000606064 577 ntBASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 RNU6-1192P-201ENST00000612197 107 ntBASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 RNU6-489P-201ENST00000618289 107 ntBASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 AC109809.1-201ENST00000619665 545 ntBASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 AC009120.7-201ENST00000623452 780 ntBASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 AC093875.1-201ENST00000623688 504 ntBASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 AC116667.2-201ENST00000641075 823 ntBASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM54Q9BYV2 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 RNA5SP85-201ENST00000365378 119 ntBASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 MIR433-201ENST00000384837 93 ntBASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 AL391422.1-201ENST00000402155 436 ntBASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 VN1R51P-201ENST00000411675 945 ntBASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 RPL26P37-201ENST00000411983 438 ntBASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 MRPS21P5-201ENST00000417885 231 ntBASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 VN1R42P-201ENST00000424651 344 ntBASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 AL160175.1-201ENST00000428124 247 ntBASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 EMC3-AS1-205ENST00000438698 534 ntBASIC6.19□□□□□ -1.42
TRIM54Q9BYV2 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms