Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 MYOM1-202ENST00000356443 5847 ntAPPRIS P4 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 RNF220-202ENST00000355387 3099 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 EIF3CL-202ENST00000398944 3053 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 PTBP3-203ENST00000343327 2755 ntTSL 2 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 ADGRE5-203ENST00000358600 2751 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 RARB-203ENST00000437042 2775 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 RNF123-201ENST00000327697 4311 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 IFIT5-201ENST00000371795 4015 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 CHI3L2-203ENST00000445067 2169 ntAPPRIS P4 TSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 NFE2L1-201ENST00000357480 4672 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 NEPRO-202ENST00000383675 4672 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 AC004801.4-201ENST00000546738 3112 ntTSL 2 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 FCN1-202ENST00000616356 4369 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 ZNF549-202ENST00000376233 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 SNX29-205ENST00000566228 8171 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 C11orf54-201ENST00000331239 2522 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 TP63-209ENST00000437221 2500 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 CDC42SE1-202ENST00000439374 3498 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 ZNF619-202ENST00000429348 4104 ntTSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 TACC2-228ENST00000515273 9245 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 LST1-201ENST00000211921 504 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 LCN2-201ENST00000277480 822 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 OR2T35-201ENST00000317450 972 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 AC007685.1-201ENST00000329806 452 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 C17orf99-201ENST00000340363 984 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 HIST1H3J-201ENST00000359303 411 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 RNU12-201ENST00000362512 150 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 RNU6-315P-201ENST00000362666 107 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 RNU6-1272P-201ENST00000362776 107 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 RNU6-486P-201ENST00000363116 107 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 RNU6-829P-201ENST00000363700 112 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 SNORA63D-201ENST00000364359 132 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 RNY4P16-201ENST00000364768 94 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 RN7SKP1-201ENST00000365525 307 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 RNU6-669P-201ENST00000365575 107 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 FLAD1-204ENST00000368428 1111 ntTSL 3 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 SETDB1-203ENST00000368963 1045 ntTSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 Y_RNA.399-201ENST00000383955 105 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 Y_RNA.528-201ENST00000384575 108 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 RNU6-1127P-201ENST00000384580 107 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 RNU6-724P-201ENST00000390958 105 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 RESP18-202ENST00000392083 626 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 MAPK12-202ENST00000395778 605 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 IGLV8OR8-1-201ENST00000399730 352 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 MIR190B-201ENST00000401119 79 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 AL603914.1-201ENST00000401964 204 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 AL121835.1-201ENST00000404250 354 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 CYCSP17-201ENST00000407870 315 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 GNLY-202ENST00000409696 858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 RN7SKP16-201ENST00000410180 299 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 AC078974.1-201ENST00000411597 223 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 AL592043.1-201ENST00000412652 526 ntTSL 3 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 TBCAP2-201ENST00000416175 326 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 AC074397.1-201ENST00000418013 1010 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 LINC01219-201ENST00000418612 722 ntTSL 2 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 AL031674.1-201ENST00000421642 486 ntTSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 AC008440.3-201ENST00000422045 555 ntTSL 4 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 RPL21P109-201ENST00000422213 475 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 RPS12P5-201ENST00000423449 371 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 RPL36P20-201ENST00000423702 319 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 AL353572.2-201ENST00000427728 748 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 MED13P1-201ENST00000428342 171 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 AP000346.2-201ENST00000430707 906 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 HUNK-AS1-201ENST00000437109 616 ntTSL 3 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 AL773572.1-202ENST00000440221 1004 ntTSL 3 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 AL160270.2-201ENST00000441226 473 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 RPS11P7-201ENST00000442125 465 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 IP6K2-218ENST00000443964 973 ntTSL 4 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 AC124916.1-201ENST00000444020 547 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 LINC01501-203ENST00000449990 791 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 AL359692.1-201ENST00000451069 265 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 RPS19P7-201ENST00000455650 396 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 RPL26P9-201ENST00000457466 433 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 SCARNA18-201ENST00000459004 134 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 RN7SL150P-201ENST00000462298 262 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 RN7SL513P-201ENST00000465715 298 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 AC010618.1-201ENST00000469924 477 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 AL136126.1-201ENST00000473603 402 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 RN7SL40P-201ENST00000474689 342 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 DAZAP2P1-201ENST00000475212 503 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 RN7SL165P-201ENST00000477476 291 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 AC127070.1-201ENST00000488441 484 ntBASIC2.08□□□□□ -2.08
KRTAP4-4Q9BYR3 KIAA0930-213ENST00000492273 403 ntTSL 3 BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms