Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 LINC01739-205ENST00000641890 573 ntBASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 AL109811.1-201ENST00000452378 2682 ntTSL 2 BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 PRRG1-208ENST00000542554 4600 ntAPPRIS P1 TSL 4 BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 KIAA0391-205ENST00000603544 2232 ntTSL 5 BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 FCRL4-201ENST00000271532 3459 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 MMGT1-201ENST00000305963 3738 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 AC079097.1-201ENST00000512187 1399 ntBASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 AL137918.1-201ENST00000624542 1922 ntBASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 TRPC3-201ENST00000264811 3675 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 CORIN-205ENST00000504584 2417 ntTSL 2 BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 RBM7-204ENST00000541475 6725 ntTSL 2 BASIC7.56□□□□□ -1.2
COL25A1Q9BXS0 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 OGDH-210ENST00000631326 4116 ntTSL 5 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 PMS2CL-204ENST00000486256 3327 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 SLFN11-202ENST00000394566 5030 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 GPR155-203ENST00000392552 6730 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 NEDD4L-203ENST00000357895 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 SCN11A-201ENST00000302328 6500 ntAPPRIS P2 TSL 5 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 AC020895.2-201ENST00000624996 1839 ntBASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 AC023154.1-203ENST00000508813 2465 ntTSL 2 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 TTC39DP-201ENST00000416781 1688 ntBASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 TMEM161B-201ENST00000296595 2594 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 ELP3-201ENST00000256398 3452 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 TMEM167A-201ENST00000502346 4630 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 RCAN1-207ENST00000481448 2816 ntTSL 5 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 AC008739.5-201ENST00000623035 1938 ntBASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 PREPL-208ENST00000410081 3080 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 ZNF304-201ENST00000282286 4202 ntAPPRIS P3 TSL 2 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 HCG18-240ENST00000454269 2430 ntTSL 2 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 Y_RNA.58-201ENST00000362807 102 ntBASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 Y_RNA.154-201ENST00000363624 102 ntBASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 RNA5SP514-201ENST00000363717 111 ntBASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 RNA5SP512-201ENST00000364550 120 ntBASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 RNA5SP510-201ENST00000364697 99 ntBASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 RNY3P1-201ENST00000365085 102 ntBASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 RNY3-201ENST00000365484 102 ntBASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 Y_RNA.490-201ENST00000384413 102 ntBASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 PSMA6P1-201ENST00000400275 741 ntBASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 RPS3P2-201ENST00000421346 701 ntBASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 AC000089.1-201ENST00000424559 801 ntBASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 AC073464.1-201ENST00000429823 534 ntBASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 AL050321.1-201ENST00000432363 400 ntBASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 AL606490.7-201ENST00000433136 191 ntBASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 ATP5F1P1-201ENST00000433775 569 ntBASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 OR51B8P-201ENST00000449892 769 ntBASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 RPS26P39-201ENST00000469206 341 ntBASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 DKK2-202ENST00000510463 908 ntTSL 3 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 AC010587.2-201ENST00000511727 448 ntBASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 RPL7L1P4-201ENST00000513004 707 ntBASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 BTF3P13-201ENST00000513224 490 ntBASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 IGHV3-32-201ENST00000519182 355 ntBASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 AK6P1-201ENST00000540219 478 ntBASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 AC079363.1-201ENST00000551366 1125 ntBASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 AC127029.1-201ENST00000560822 237 ntBASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 OR4K7P-201ENST00000580232 945 ntBASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 AC211433.2-201ENST00000608433 387 ntBASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 uc_338.21-201ENST00000622458 147 ntBASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 AC005858.3-201ENST00000624756 589 ntBASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 PAAF1-202ENST00000376384 1500 ntTSL 5 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 SIRT5-205ENST00000606117 3922 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 BMX-202ENST00000348343 2531 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 EML5-201ENST00000380664 5910 ntTSL 5 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 GHR-212ENST00000620156 4529 ntTSL 5 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 YIPF5-201ENST00000274496 3147 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 UBE2D3-203ENST00000343106 2389 ntAPPRIS P4 TSL 2 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 DYNLT1-202ENST00000367088 2891 ntTSL 2 BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
COL25A1Q9BXS0 LINC01304-204ENST00000454455 2454 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms