Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 SLC24A1-211ENST00000544319 3169 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 SYK-202ENST00000375747 4908 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 RASGRP3-201ENST00000402538 4738 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 CLIP1-209ENST00000537178 5229 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 AC020904.2-202ENST00000614660 1401 ntBASIC2.02□□□□□ -2.09
HMCN1Q96RW7 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 RN7SKP6-201ENST00000364795 319 ntBASIC2.02□□□□□ -2.09
HMCN1Q96RW7 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 OR7E101P-201ENST00000400428 513 ntBASIC2.02□□□□□ -2.09
HMCN1Q96RW7 RNU4-37P-201ENST00000410214 84 ntBASIC2.02□□□□□ -2.09
HMCN1Q96RW7 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 AC019055.1-201ENST00000432822 443 ntTSL 3 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 AL049745.1-201ENST00000433953 286 ntBASIC2.02□□□□□ -2.09
HMCN1Q96RW7 RPL23AP83-201ENST00000434984 473 ntBASIC2.02□□□□□ -2.09
HMCN1Q96RW7 MTND2P29-201ENST00000438595 412 ntBASIC2.02□□□□□ -2.09
HMCN1Q96RW7 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 RPS3AP15-201ENST00000483874 781 ntBASIC2.02□□□□□ -2.09
HMCN1Q96RW7 AC008897.1-201ENST00000494006 347 ntBASIC2.02□□□□□ -2.09
HMCN1Q96RW7 RPL24-206ENST00000495401 478 ntTSL 2 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 RNU6-504P-201ENST00000516568 104 ntBASIC2.02□□□□□ -2.09
HMCN1Q96RW7 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 AC245884.10-201ENST00000597355 337 ntBASIC2.02□□□□□ -2.09
HMCN1Q96RW7 AC139493.1-201ENST00000604368 397 ntBASIC2.02□□□□□ -2.09
HMCN1Q96RW7 AC073046.2-201ENST00000604756 527 ntBASIC2.02□□□□□ -2.09
HMCN1Q96RW7 AL133507.1-201ENST00000605269 557 ntBASIC2.02□□□□□ -2.09
HMCN1Q96RW7 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 CU639417.4-201ENST00000623928 207 ntBASIC2.02□□□□□ -2.09
HMCN1Q96RW7 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 AC099654.6-201ENST00000636487 512 ntBASIC2.02□□□□□ -2.09
HMCN1Q96RW7 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 VIL1-201ENST00000248444 6531 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 AC011460.1-201ENST00000636268 1834 ntBASIC2.02□□□□□ -2.09
HMCN1Q96RW7 ACVR2A-207ENST00000535787 5166 ntTSL 2 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 CTNNA1-210ENST00000518825 3536 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 NDUFV3-201ENST00000340344 4676 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 NEDD1-201ENST00000266742 4046 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 WRAP53-201ENST00000316024 4011 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 TMOD3-201ENST00000308580 8255 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 U3.38-201ENST00000408534 216 ntBASIC2.02□□□□□ -2.09
HMCN1Q96RW7 RN7SKP161-201ENST00000411110 305 ntBASIC2.02□□□□□ -2.09
HMCN1Q96RW7 HSFY4P-201ENST00000415994 1181 ntBASIC2.02□□□□□ -2.09
HMCN1Q96RW7 AC073143.1-201ENST00000436316 395 ntBASIC2.02□□□□□ -2.09
HMCN1Q96RW7 RPL7P33-201ENST00000444159 742 ntBASIC2.02□□□□□ -2.09
HMCN1Q96RW7 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 CST12P-201ENST00000457644 362 ntBASIC2.02□□□□□ -2.09
HMCN1Q96RW7 RPL34P33-201ENST00000486062 334 ntBASIC2.02□□□□□ -2.09
HMCN1Q96RW7 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 CR383658.1-201ENST00000514609 734 ntBASIC2.02□□□□□ -2.09
HMCN1Q96RW7 SCARNA18.1-201ENST00000516330 83 ntBASIC2.02□□□□□ -2.09
HMCN1Q96RW7 SNORA40.15-201ENST00000516884 107 ntBASIC2.02□□□□□ -2.09
HMCN1Q96RW7 AC115837.1-201ENST00000517662 1001 ntBASIC2.02□□□□□ -2.09
HMCN1Q96RW7 AC120036.3-201ENST00000517826 292 ntBASIC2.02□□□□□ -2.09
HMCN1Q96RW7 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 IGKV2D-10-201ENST00000520194 281 ntBASIC2.02□□□□□ -2.09
HMCN1Q96RW7 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC2.02□□□□□ -2.09
HMCN1Q96RW7 AC123904.3-201ENST00000547218 814 ntBASIC2.02□□□□□ -2.09
HMCN1Q96RW7 AL162632.2-201ENST00000553933 399 ntBASIC2.02□□□□□ -2.09
HMCN1Q96RW7 AL049838.1-201ENST00000563647 981 ntBASIC2.02□□□□□ -2.09
HMCN1Q96RW7 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms