Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RPRD1AQ96P16 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
RPRD1AQ96P16 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RPRD1AQ96P16 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.04□□□□□ -1.44
RPRD1AQ96P16 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RPRD1AQ96P16 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
RPRD1AQ96P16 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.04□□□□□ -1.44
RPRD1AQ96P16 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RPRD1AQ96P16 SNORD1C-201ENST00000363315 78 ntBASIC6.04□□□□□ -1.44
RPRD1AQ96P16 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.04□□□□□ -1.44
RPRD1AQ96P16 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RPRD1AQ96P16 RN7SKP29-201ENST00000410957 272 ntBASIC6.04□□□□□ -1.44
RPRD1AQ96P16 RPS29P14-201ENST00000431518 171 ntBASIC6.04□□□□□ -1.44
RPRD1AQ96P16 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.04□□□□□ -1.44
RPRD1AQ96P16 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.04□□□□□ -1.44
RPRD1AQ96P16 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.04□□□□□ -1.44
RPRD1AQ96P16 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RPRD1AQ96P16 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.04□□□□□ -1.44
RPRD1AQ96P16 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.04□□□□□ -1.44
RPRD1AQ96P16 HMGN2P36-201ENST00000529541 409 ntBASIC6.04□□□□□ -1.44
RPRD1AQ96P16 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.04□□□□□ -1.44
RPRD1AQ96P16 AC079600.1-201ENST00000550326 297 ntBASIC6.04□□□□□ -1.44
RPRD1AQ96P16 AC091078.2-201ENST00000557145 559 ntBASIC6.04□□□□□ -1.44
RPRD1AQ96P16 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.04□□□□□ -1.44
RPRD1AQ96P16 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RPRD1AQ96P16 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RPRD1AQ96P16 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6.04□□□□□ -1.44
RPRD1AQ96P16 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.04□□□□□ -1.44
RPRD1AQ96P16 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.04□□□□□ -1.44
RPRD1AQ96P16 AC005225.5-201ENST00000623547 2225 ntBASIC6.04□□□□□ -1.44
RPRD1AQ96P16 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.04□□□□□ -1.44
RPRD1AQ96P16 AC015689.2-201ENST00000528172 1738 ntBASIC6.04□□□□□ -1.44
RPRD1AQ96P16 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.04□□□□□ -1.44
RPRD1AQ96P16 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.04□□□□□ -1.44
RPRD1AQ96P16 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
RPRD1AQ96P16 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
RPRD1AQ96P16 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RPRD1AQ96P16 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
RPRD1AQ96P16 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RPRD1AQ96P16 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
RPRD1AQ96P16 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.03□□□□□ -1.44
RPRD1AQ96P16 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
RPRD1AQ96P16 RPL23AP17-201ENST00000401064 499 ntBASIC6.03□□□□□ -1.44
RPRD1AQ96P16 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.03□□□□□ -1.44
RPRD1AQ96P16 MRPL53P1-201ENST00000414323 319 ntBASIC6.03□□□□□ -1.44
RPRD1AQ96P16 CYCSP51-201ENST00000443545 318 ntBASIC6.03□□□□□ -1.44
RPRD1AQ96P16 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.03□□□□□ -1.44
RPRD1AQ96P16 RNU1-88P-201ENST00000459274 128 ntBASIC6.03□□□□□ -1.44
RPRD1AQ96P16 AL157777.1-201ENST00000468100 304 ntBASIC6.03□□□□□ -1.44
RPRD1AQ96P16 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RPRD1AQ96P16 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
RPRD1AQ96P16 GOLGA5P1-201ENST00000507317 980 ntBASIC6.03□□□□□ -1.44
RPRD1AQ96P16 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.03□□□□□ -1.44
RPRD1AQ96P16 RN7SKP67-201ENST00000515905 235 ntBASIC6.03□□□□□ -1.44
RPRD1AQ96P16 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.03□□□□□ -1.44
RPRD1AQ96P16 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.03□□□□□ -1.44
RPRD1AQ96P16 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.03□□□□□ -1.44
RPRD1AQ96P16 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.03□□□□□ -1.44
RPRD1AQ96P16 AP001284.1-201ENST00000528393 2118 ntBASIC6.03□□□□□ -1.44
RPRD1AQ96P16 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
RPRD1AQ96P16 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.03□□□□□ -1.44
RPRD1AQ96P16 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.03□□□□□ -1.44
RPRD1AQ96P16 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.03□□□□□ -1.44
RPRD1AQ96P16 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.03□□□□□ -1.44
RPRD1AQ96P16 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.03□□□□□ -1.44
RPRD1AQ96P16 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.03□□□□□ -1.44
RPRD1AQ96P16 AC008521.2-201ENST00000591021 259 ntBASIC6.03□□□□□ -1.44
RPRD1AQ96P16 AC027243.2-201ENST00000602530 724 ntBASIC6.03□□□□□ -1.44
RPRD1AQ96P16 AL139041.1-201ENST00000605480 610 ntBASIC6.03□□□□□ -1.44
RPRD1AQ96P16 AL355974.3-201ENST00000617383 467 ntBASIC6.03□□□□□ -1.44
RPRD1AQ96P16 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.03□□□□□ -1.44
RPRD1AQ96P16 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
RPRD1AQ96P16 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RPRD1AQ96P16 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
RPRD1AQ96P16 AC239868.2-201ENST00000564237 4527 ntBASIC6.02□□□□□ -1.45
RPRD1AQ96P16 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.02□□□□□ -1.45
RPRD1AQ96P16 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
RPRD1AQ96P16 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.02□□□□□ -1.45
RPRD1AQ96P16 AC106872.5-201ENST00000508856 1416 ntBASIC6.02□□□□□ -1.45
RPRD1AQ96P16 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.02□□□□□ -1.45
RPRD1AQ96P16 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.02□□□□□ -1.45
RPRD1AQ96P16 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RPRD1AQ96P16 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RPRD1AQ96P16 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.02□□□□□ -1.45
RPRD1AQ96P16 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RPRD1AQ96P16 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
RPRD1AQ96P16 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
RPRD1AQ96P16 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RPRD1AQ96P16 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.02□□□□□ -1.45
RPRD1AQ96P16 RPS3AP2-201ENST00000407190 754 ntBASIC6.02□□□□□ -1.45
RPRD1AQ96P16 AK4P4-201ENST00000419465 646 ntBASIC6.02□□□□□ -1.45
RPRD1AQ96P16 MRPS21P2-201ENST00000424704 264 ntBASIC6.02□□□□□ -1.45
RPRD1AQ96P16 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.02□□□□□ -1.45
RPRD1AQ96P16 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.02□□□□□ -1.45
RPRD1AQ96P16 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
RPRD1AQ96P16 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RPRD1AQ96P16 AC073109.1-201ENST00000445066 978 ntBASIC6.02□□□□□ -1.45
RPRD1AQ96P16 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.02□□□□□ -1.45
RPRD1AQ96P16 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.02□□□□□ -1.45
RPRD1AQ96P16 TRBV5-2-201ENST00000489095 273 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms