Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 RN7SKP293-201ENST00000411389 296 ntBASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AC004453.1-201ENST00000487895 408 ntBASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 RNF138P2-201ENST00000603490 592 ntBASIC1.79□□□□□ -2.12
SYNE1Q8NF91 CYP4F35P-202ENST00000636121 390 ntBASIC1.79□□□□□ -2.12
SYNE1Q8NF91 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 RNU11-6P-201ENST00000391127 133 ntBASIC1.79□□□□□ -2.12
SYNE1Q8NF91 RPL37P18-201ENST00000411602 243 ntBASIC1.79□□□□□ -2.12
SYNE1Q8NF91 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 SDC4P-201ENST00000453285 601 ntBASIC1.79□□□□□ -2.12
SYNE1Q8NF91 RPS27AP3-201ENST00000453803 454 ntBASIC1.79□□□□□ -2.12
SYNE1Q8NF91 DNAJB5P1-201ENST00000454004 806 ntBASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AZGP1P2-201ENST00000454506 345 ntBASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AL157777.1-201ENST00000468100 304 ntBASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 MIR4436B2-201ENST00000581415 91 ntBASIC1.79□□□□□ -2.12
SYNE1Q8NF91 MIR4436B1-201ENST00000583272 91 ntBASIC1.79□□□□□ -2.12
SYNE1Q8NF91 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 OTX2P1-201ENST00000450956 354 ntBASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 CYP4F30P-202ENST00000420048 405 ntBASIC1.79□□□□□ -2.12
SYNE1Q8NF91 RPL7L1P9-201ENST00000431298 745 ntBASIC1.79□□□□□ -2.12
SYNE1Q8NF91 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AC009220.1-201ENST00000451614 275 ntBASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AC079841.1-201ENST00000481228 950 ntBASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AC108693.1-201ENST00000496068 432 ntBASIC1.79□□□□□ -2.12
SYNE1Q8NF91 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AC006499.3-201ENST00000506077 748 ntBASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AC010343.2-201ENST00000510162 224 ntBASIC1.79□□□□□ -2.12
SYNE1Q8NF91 SUMO2P7-201ENST00000511179 285 ntBASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AL390318.1-201ENST00000624564 687 ntBASIC1.79□□□□□ -2.12
SYNE1Q8NF91 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 FMO7P-201ENST00000436045 768 ntBASIC1.79□□□□□ -2.12
SYNE1Q8NF91 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AC253576.1-201ENST00000511645 1156 ntBASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AC022404.1-201ENST00000555320 273 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms