Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC013701.1-201ENST00000522657 465 ntBASIC5.62□□□□□ -1.51
RIF1Q5UIP0 PCNPP1-201ENST00000552501 511 ntBASIC5.62□□□□□ -1.51
RIF1Q5UIP0 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.62□□□□□ -1.51
RIF1Q5UIP0 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.62□□□□□ -1.51
RIF1Q5UIP0 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.61□□□□□ -1.51
RIF1Q5UIP0 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RIF1Q5UIP0 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RIF1Q5UIP0 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.61□□□□□ -1.51
RIF1Q5UIP0 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RIF1Q5UIP0 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RIF1Q5UIP0 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RIF1Q5UIP0 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC5.61□□□□□ -1.51
RIF1Q5UIP0 NENFP1-201ENST00000419476 466 ntBASIC5.61□□□□□ -1.51
RIF1Q5UIP0 CYP4F30P-202ENST00000420048 405 ntBASIC5.61□□□□□ -1.51
RIF1Q5UIP0 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.61□□□□□ -1.51
RIF1Q5UIP0 CNOT7P1-201ENST00000429006 852 ntBASIC5.61□□□□□ -1.51
RIF1Q5UIP0 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC5.61□□□□□ -1.51
RIF1Q5UIP0 AC087672.1-201ENST00000479876 766 ntBASIC5.61□□□□□ -1.51
RIF1Q5UIP0 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.61□□□□□ -1.51
RIF1Q5UIP0 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.61□□□□□ -1.51
RIF1Q5UIP0 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
RIF1Q5UIP0 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.61□□□□□ -1.51
RIF1Q5UIP0 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RIF1Q5UIP0 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RIF1Q5UIP0 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RIF1Q5UIP0 AC087516.1-201ENST00000561236 2428 ntBASIC5.61□□□□□ -1.51
RIF1Q5UIP0 CTAGE15-201ENST00000420911 2587 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
RIF1Q5UIP0 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.61□□□□□ -1.51
RIF1Q5UIP0 AL353796.1-201ENST00000561542 3241 ntBASIC5.61□□□□□ -1.51
RIF1Q5UIP0 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC5.61□□□□□ -1.51
RIF1Q5UIP0 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
RIF1Q5UIP0 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.61□□□□□ -1.51
RIF1Q5UIP0 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC5.61□□□□□ -1.51
RIF1Q5UIP0 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.61□□□□□ -1.51
RIF1Q5UIP0 GPD2-202ENST00000409125 2661 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RIF1Q5UIP0 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
RIF1Q5UIP0 AL159987.1-201ENST00000347911 293 ntBASIC5.6□□□□□ -1.51
RIF1Q5UIP0 RNA5SP211-201ENST00000365516 117 ntBASIC5.6□□□□□ -1.51
RIF1Q5UIP0 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 OR6D1P-201ENST00000436165 939 ntBASIC5.6□□□□□ -1.51
RIF1Q5UIP0 AL359091.1-201ENST00000449048 1734 ntBASIC5.6□□□□□ -1.51
RIF1Q5UIP0 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.6□□□□□ -1.51
RIF1Q5UIP0 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 AC135068.12-201ENST00000637370 931 ntBASIC5.6□□□□□ -1.51
RIF1Q5UIP0 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 CEBPG-202ENST00000585933 3845 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 AC068138.1-201ENST00000412635 217 ntBASIC5.6□□□□□ -1.51
RIF1Q5UIP0 LINC01881-201ENST00000416103 412 ntBASIC5.6□□□□□ -1.51
RIF1Q5UIP0 RPS7P3-201ENST00000443360 580 ntBASIC5.6□□□□□ -1.51
RIF1Q5UIP0 AC104164.1-201ENST00000460282 590 ntBASIC5.6□□□□□ -1.51
RIF1Q5UIP0 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 AC008957.3-201ENST00000624112 2242 ntBASIC5.6□□□□□ -1.51
RIF1Q5UIP0 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RIF1Q5UIP0 AC009120.2-204ENST00000621548 2032 ntBASIC5.6□□□□□ -1.51
RIF1Q5UIP0 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RIF1Q5UIP0 MIR23B-201ENST00000384832 97 ntBASIC5.59□□□□□ -1.51
RIF1Q5UIP0 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.59□□□□□ -1.51
RIF1Q5UIP0 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC5.59□□□□□ -1.51
RIF1Q5UIP0 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.59□□□□□ -1.51
RIF1Q5UIP0 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.59□□□□□ -1.51
RIF1Q5UIP0 RN7SKP147-201ENST00000517154 244 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms