Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 SLC16A4-206ENST00000472422 2420 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 AP002800.1-201ENST00000624982 2225 ntBASIC8.86□□□□□ -0.99
RC3H1Q5TC82 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 ING3-204ENST00000431467 1447 ntTSL 2 BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 SYTL4-204ENST00000372989 3885 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 STXBP5L-205ENST00000472879 3067 ntTSL 5 BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 AC000099.1-202ENST00000413812 1912 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
RC3H1Q5TC82 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC8.85□□□□□ -0.99
RC3H1Q5TC82 AC090983.1-201ENST00000623426 3897 ntBASIC8.85□□□□□ -0.99
RC3H1Q5TC82 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
RC3H1Q5TC82 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
RC3H1Q5TC82 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
RC3H1Q5TC82 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
RC3H1Q5TC82 SUPT16H-201ENST00000216297 4684 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
RC3H1Q5TC82 AC129502.1-201ENST00000623261 1654 ntBASIC8.85□□□□□ -0.99
RC3H1Q5TC82 DGKG-202ENST00000344484 3445 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
RC3H1Q5TC82 AC125603.4-201ENST00000621942 2699 ntBASIC8.85□□□□□ -0.99
RC3H1Q5TC82 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC8.85□□□□□ -0.99
RC3H1Q5TC82 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC8.85□□□□□ -0.99
RC3H1Q5TC82 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
RC3H1Q5TC82 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
RC3H1Q5TC82 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
RC3H1Q5TC82 AL391419.1-201ENST00000398901 1275 ntBASIC8.85□□□□□ -0.99
RC3H1Q5TC82 FGF7P8-201ENST00000402994 292 ntBASIC8.85□□□□□ -0.99
RC3H1Q5TC82 AL590002.1-201ENST00000406554 418 ntBASIC8.85□□□□□ -0.99
RC3H1Q5TC82 AL512430.2-201ENST00000406786 339 ntBASIC8.85□□□□□ -0.99
RC3H1Q5TC82 TRBV24OR9-2-201ENST00000416632 435 ntBASIC8.85□□□□□ -0.99
RC3H1Q5TC82 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC8.85□□□□□ -0.99
RC3H1Q5TC82 HIGD1AP12-201ENST00000427832 281 ntBASIC8.85□□□□□ -0.99
RC3H1Q5TC82 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC8.85□□□□□ -0.99
RC3H1Q5TC82 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC8.85□□□□□ -0.99
RC3H1Q5TC82 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
RC3H1Q5TC82 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC8.85□□□□□ -0.99
RC3H1Q5TC82 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC8.85□□□□□ -0.99
RC3H1Q5TC82 SDHCP3-201ENST00000445371 506 ntBASIC8.85□□□□□ -0.99
RC3H1Q5TC82 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC8.85□□□□□ -0.99
RC3H1Q5TC82 AC233982.1-201ENST00000451247 436 ntBASIC8.85□□□□□ -0.99
RC3H1Q5TC82 AURKAPS1-201ENST00000451805 1212 ntBASIC8.85□□□□□ -0.99
RC3H1Q5TC82 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
RC3H1Q5TC82 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC8.85□□□□□ -0.99
RC3H1Q5TC82 AC066616.1-201ENST00000486795 413 ntBASIC8.85□□□□□ -0.99
RC3H1Q5TC82 AC008628.2-201ENST00000502605 298 ntBASIC8.85□□□□□ -0.99
RC3H1Q5TC82 AC112198.1-201ENST00000505369 1220 ntBASIC8.85□□□□□ -0.99
RC3H1Q5TC82 AC008837.1-201ENST00000511513 412 ntBASIC8.85□□□□□ -0.99
RC3H1Q5TC82 AC022296.2-201ENST00000512424 202 ntBASIC8.85□□□□□ -0.99
RC3H1Q5TC82 AC027801.3-201ENST00000515049 698 ntBASIC8.85□□□□□ -0.99
RC3H1Q5TC82 AC120036.3-201ENST00000517826 292 ntBASIC8.85□□□□□ -0.99
RC3H1Q5TC82 AC078955.1-201ENST00000547123 882 ntTSL 5 BASIC8.85□□□□□ -0.99
RC3H1Q5TC82 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC8.85□□□□□ -0.99
RC3H1Q5TC82 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC8.85□□□□□ -0.99
RC3H1Q5TC82 NDUFA5P11-201ENST00000567995 343 ntBASIC8.85□□□□□ -0.99
RC3H1Q5TC82 AC007255.2-201ENST00000604053 631 ntBASIC8.85□□□□□ -0.99
RC3H1Q5TC82 AL162730.1-201ENST00000605734 292 ntBASIC8.85□□□□□ -0.99
RC3H1Q5TC82 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC8.85□□□□□ -0.99
RC3H1Q5TC82 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC8.85□□□□□ -0.99
RC3H1Q5TC82 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC8.85□□□□□ -0.99
RC3H1Q5TC82 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC8.85□□□□□ -0.99
RC3H1Q5TC82 AC073869.7-201ENST00000640874 297 ntBASIC8.85□□□□□ -0.99
RC3H1Q5TC82 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC8.85□□□□□ -0.99
RC3H1Q5TC82 NACA-216ENST00000550952 2922 ntTSL 2 BASIC8.85□□□□□ -0.99
RC3H1Q5TC82 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
RC3H1Q5TC82 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
RC3H1Q5TC82 ZNF569-202ENST00000392149 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
RC3H1Q5TC82 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
RC3H1Q5TC82 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
RC3H1Q5TC82 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC8.85□□□□□ -0.99
RC3H1Q5TC82 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
RC3H1Q5TC82 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
RC3H1Q5TC82 FCGR3B-209ENST00000614870 1993 ntTSL 5 BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 NEK2P4-201ENST00000425793 1329 ntBASIC8.84□□□□□ -0.99
RC3H1Q5TC82 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 NUDT4-206ENST00000549992 3607 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 SKA2-201ENST00000330137 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 UBE2Q2P1-202ENST00000354771 883 ntBASIC8.84□□□□□ -0.99
RC3H1Q5TC82 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 RNA5SP140-201ENST00000364524 92 ntBASIC8.84□□□□□ -0.99
RC3H1Q5TC82 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC8.84□□□□□ -0.99
RC3H1Q5TC82 PPIAP26-201ENST00000377951 522 ntBASIC8.84□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms