Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.74□□□□□ -1.33
GABPAQ06546 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
GABPAQ06546 GABARAPL3-201ENST00000412799 354 ntBASIC6.74□□□□□ -1.33
GABPAQ06546 GTF3AP1-201ENST00000416942 1004 ntBASIC6.74□□□□□ -1.33
GABPAQ06546 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.74□□□□□ -1.33
GABPAQ06546 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.74□□□□□ -1.33
GABPAQ06546 OSTCP1-201ENST00000455507 450 ntBASIC6.74□□□□□ -1.33
GABPAQ06546 LDHBP2-201ENST00000456969 1005 ntBASIC6.74□□□□□ -1.33
GABPAQ06546 AC011225.1-201ENST00000457751 369 ntBASIC6.74□□□□□ -1.33
GABPAQ06546 RPS4XP14-201ENST00000493072 781 ntBASIC6.74□□□□□ -1.33
GABPAQ06546 AC108693.1-201ENST00000496068 432 ntBASIC6.74□□□□□ -1.33
GABPAQ06546 AC253576.1-201ENST00000511645 1156 ntBASIC6.74□□□□□ -1.33
GABPAQ06546 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.74□□□□□ -1.33
GABPAQ06546 AC027026.1-201ENST00000532323 742 ntBASIC6.74□□□□□ -1.33
GABPAQ06546 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.74□□□□□ -1.33
GABPAQ06546 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
GABPAQ06546 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.74□□□□□ -1.33
GABPAQ06546 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
GABPAQ06546 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.74□□□□□ -1.33
GABPAQ06546 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.74□□□□□ -1.33
GABPAQ06546 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.74□□□□□ -1.33
GABPAQ06546 AC079414.3-201ENST00000612986 1090 ntBASIC6.74□□□□□ -1.33
GABPAQ06546 MIR6826-201ENST00000617808 98 ntBASIC6.74□□□□□ -1.33
GABPAQ06546 AC013268.3-201ENST00000262716 2324 ntBASIC6.74□□□□□ -1.33
GABPAQ06546 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
GABPAQ06546 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
GABPAQ06546 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.74□□□□□ -1.33
GABPAQ06546 AP004607.3-201ENST00000530354 3915 ntBASIC6.74□□□□□ -1.33
GABPAQ06546 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
GABPAQ06546 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.74□□□□□ -1.33
GABPAQ06546 AC089998.1-201ENST00000548575 3141 ntBASIC6.74□□□□□ -1.33
GABPAQ06546 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
GABPAQ06546 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
GABPAQ06546 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
GABPAQ06546 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
GABPAQ06546 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
GABPAQ06546 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
GABPAQ06546 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.73□□□□□ -1.33
GABPAQ06546 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
GABPAQ06546 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
GABPAQ06546 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
GABPAQ06546 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
GABPAQ06546 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
GABPAQ06546 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
GABPAQ06546 RNA5SP234-201ENST00000363916 119 ntBASIC6.73□□□□□ -1.33
GABPAQ06546 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
GABPAQ06546 RMRPP5-201ENST00000411156 267 ntBASIC6.73□□□□□ -1.33
GABPAQ06546 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
GABPAQ06546 AL133173.1-201ENST00000423458 397 ntBASIC6.73□□□□□ -1.33
GABPAQ06546 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.73□□□□□ -1.33
GABPAQ06546 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.73□□□□□ -1.33
GABPAQ06546 AL450996.1-201ENST00000445574 1202 ntBASIC6.73□□□□□ -1.33
GABPAQ06546 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC6.73□□□□□ -1.33
GABPAQ06546 NPM1P19-201ENST00000450070 712 ntBASIC6.73□□□□□ -1.33
GABPAQ06546 RNU1-88P-201ENST00000459274 128 ntBASIC6.73□□□□□ -1.33
GABPAQ06546 RPL35AP19-201ENST00000469425 329 ntBASIC6.73□□□□□ -1.33
GABPAQ06546 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.73□□□□□ -1.33
GABPAQ06546 EIF3LP3-201ENST00000495197 822 ntBASIC6.73□□□□□ -1.33
GABPAQ06546 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.73□□□□□ -1.33
GABPAQ06546 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.73□□□□□ -1.33
GABPAQ06546 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.73□□□□□ -1.33
GABPAQ06546 IGKV2-19-201ENST00000518132 283 ntBASIC6.73□□□□□ -1.33
GABPAQ06546 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.73□□□□□ -1.33
GABPAQ06546 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.73□□□□□ -1.33
GABPAQ06546 AC079395.2-201ENST00000610982 737 ntBASIC6.73□□□□□ -1.33
GABPAQ06546 AL359513.1-201ENST00000614364 557 ntBASIC6.73□□□□□ -1.33
GABPAQ06546 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
GABPAQ06546 AC009779.8-201ENST00000641684 4384 ntBASIC6.73□□□□□ -1.33
GABPAQ06546 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
GABPAQ06546 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
GABPAQ06546 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
GABPAQ06546 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
GABPAQ06546 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.73□□□□□ -1.33
GABPAQ06546 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
GABPAQ06546 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
GABPAQ06546 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
GABPAQ06546 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
GABPAQ06546 AC110716.2-201ENST00000563865 3945 ntBASIC6.72□□□□□ -1.33
GABPAQ06546 AC073342.2-201ENST00000595842 1800 ntBASIC6.72□□□□□ -1.33
GABPAQ06546 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.72□□□□□ -1.33
GABPAQ06546 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
GABPAQ06546 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
GABPAQ06546 SNORD1C-201ENST00000363315 78 ntBASIC6.72□□□□□ -1.33
GABPAQ06546 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
GABPAQ06546 GAPDHP42-201ENST00000406848 981 ntBASIC6.72□□□□□ -1.33
GABPAQ06546 MARK2P12-201ENST00000420129 585 ntBASIC6.72□□□□□ -1.33
GABPAQ06546 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.72□□□□□ -1.33
GABPAQ06546 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.72□□□□□ -1.33
GABPAQ06546 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.72□□□□□ -1.33
GABPAQ06546 AC019185.1-201ENST00000442718 389 ntBASIC6.72□□□□□ -1.33
GABPAQ06546 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
GABPAQ06546 RANP1-206ENST00000455094 651 ntBASIC6.72□□□□□ -1.33
GABPAQ06546 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.72□□□□□ -1.33
GABPAQ06546 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.72□□□□□ -1.33
GABPAQ06546 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.72□□□□□ -1.33
GABPAQ06546 KATNBL1P4-201ENST00000503545 918 ntBASIC6.72□□□□□ -1.33
GABPAQ06546 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.72□□□□□ -1.33
GABPAQ06546 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
GABPAQ06546 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
GABPAQ06546 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms