Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.81□□□□□ -1.48
RPS3AP61247 AC026898.1-201ENST00000586404 571 ntBASIC5.81□□□□□ -1.48
RPS3AP61247 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.81□□□□□ -1.48
RPS3AP61247 MIR6889-201ENST00000613185 59 ntBASIC5.81□□□□□ -1.48
RPS3AP61247 AL122023.1-201ENST00000622847 530 ntBASIC5.81□□□□□ -1.48
RPS3AP61247 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.81□□□□□ -1.48
RPS3AP61247 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.81□□□□□ -1.48
RPS3AP61247 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.81□□□□□ -1.48
RPS3AP61247 AC010325.3-201ENST00000641084 394 ntBASIC5.81□□□□□ -1.48
RPS3AP61247 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.81□□□□□ -1.48
RPS3AP61247 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
RPS3AP61247 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RPS3AP61247 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RPS3AP61247 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RPS3AP61247 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RPS3AP61247 LINC01613-201ENST00000561476 2780 ntBASIC5.81□□□□□ -1.48
RPS3AP61247 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RPS3AP61247 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
RPS3AP61247 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RPS3AP61247 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RPS3AP61247 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RPS3AP61247 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
RPS3AP61247 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.8□□□□□ -1.48
RPS3AP61247 AL359955.1-201ENST00000455242 3275 ntBASIC5.8□□□□□ -1.48
RPS3AP61247 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.8□□□□□ -1.48
RPS3AP61247 AL591135.1-201ENST00000401578 5914 ntBASIC5.8□□□□□ -1.48
RPS3AP61247 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
RPS3AP61247 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RPS3AP61247 SHQ1P1-201ENST00000437111 1544 ntBASIC5.8□□□□□ -1.48
RPS3AP61247 AC017002.4-201ENST00000604721 1525 ntBASIC5.8□□□□□ -1.48
RPS3AP61247 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RPS3AP61247 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.8□□□□□ -1.48
RPS3AP61247 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.8□□□□□ -1.48
RPS3AP61247 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RPS3AP61247 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RPS3AP61247 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
RPS3AP61247 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
RPS3AP61247 SNORD16-201ENST00000362803 99 ntBASIC5.8□□□□□ -1.48
RPS3AP61247 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RPS3AP61247 RNU6-40P-201ENST00000384254 107 ntBASIC5.8□□□□□ -1.48
RPS3AP61247 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.8□□□□□ -1.48
RPS3AP61247 RNU2-22P-201ENST00000411266 212 ntBASIC5.8□□□□□ -1.48
RPS3AP61247 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.8□□□□□ -1.48
RPS3AP61247 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.8□□□□□ -1.48
RPS3AP61247 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.8□□□□□ -1.48
RPS3AP61247 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.8□□□□□ -1.48
RPS3AP61247 EMC3-AS1-205ENST00000438698 534 ntBASIC5.8□□□□□ -1.48
RPS3AP61247 ARAFP2-201ENST00000440565 559 ntBASIC5.8□□□□□ -1.48
RPS3AP61247 AC245517.2-201ENST00000442890 346 ntBASIC5.8□□□□□ -1.48
RPS3AP61247 NPM1P19-201ENST00000450070 712 ntBASIC5.8□□□□□ -1.48
RPS3AP61247 VN1R38P-201ENST00000450265 887 ntBASIC5.8□□□□□ -1.48
RPS3AP61247 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.8□□□□□ -1.48
RPS3AP61247 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.8□□□□□ -1.48
RPS3AP61247 AL445687.2-201ENST00000458156 728 ntBASIC5.8□□□□□ -1.48
RPS3AP61247 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.8□□□□□ -1.48
RPS3AP61247 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.8□□□□□ -1.48
RPS3AP61247 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.8□□□□□ -1.48
RPS3AP61247 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.8□□□□□ -1.48
RPS3AP61247 AC106800.3-201ENST00000511389 308 ntBASIC5.8□□□□□ -1.48
RPS3AP61247 AC116917.1-201ENST00000520558 305 ntBASIC5.8□□□□□ -1.48
RPS3AP61247 OR4A41P-201ENST00000533053 928 ntBASIC5.8□□□□□ -1.48
RPS3AP61247 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.8□□□□□ -1.48
RPS3AP61247 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.8□□□□□ -1.48
RPS3AP61247 OR4H6P-201ENST00000563771 921 ntBASIC5.8□□□□□ -1.48
RPS3AP61247 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.8□□□□□ -1.48
RPS3AP61247 AC233702.7-202ENST00000582941 211 ntBASIC5.8□□□□□ -1.48
RPS3AP61247 AC063977.7-201ENST00000594454 337 ntBASIC5.8□□□□□ -1.48
RPS3AP61247 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.8□□□□□ -1.48
RPS3AP61247 AC005828.7-201ENST00000607331 556 ntBASIC5.8□□□□□ -1.48
RPS3AP61247 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.8□□□□□ -1.48
RPS3AP61247 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.8□□□□□ -1.48
RPS3AP61247 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.8□□□□□ -1.48
RPS3AP61247 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.8□□□□□ -1.48
RPS3AP61247 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC5.8□□□□□ -1.48
RPS3AP61247 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
RPS3AP61247 SAGE3P-201ENST00000619800 1635 ntBASIC5.8□□□□□ -1.48
RPS3AP61247 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RPS3AP61247 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.8□□□□□ -1.48
RPS3AP61247 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
RPS3AP61247 TCP11X1-202ENST00000622971 1372 ntBASIC5.8□□□□□ -1.48
RPS3AP61247 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RPS3AP61247 PARP4P2-201ENST00000446672 3326 ntBASIC5.79□□□□□ -1.48
RPS3AP61247 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RPS3AP61247 AC006484.1-201ENST00000435086 1884 ntBASIC5.79□□□□□ -1.48
RPS3AP61247 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RPS3AP61247 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
RPS3AP61247 HSPD1P7-201ENST00000447985 1686 ntBASIC5.79□□□□□ -1.48
RPS3AP61247 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
RPS3AP61247 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.79□□□□□ -1.48
RPS3AP61247 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
RPS3AP61247 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
RPS3AP61247 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
RPS3AP61247 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
RPS3AP61247 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.79□□□□□ -1.48
RPS3AP61247 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RPS3AP61247 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RPS3AP61247 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.79□□□□□ -1.48
RPS3AP61247 SNORA5.1-201ENST00000384275 131 ntBASIC5.79□□□□□ -1.48
RPS3AP61247 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.79□□□□□ -1.48
RPS3AP61247 CYCSP52-201ENST00000422857 310 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms