Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 RNU1-65P-201ENST00000363919 148 ntBASIC6.49□□□□□ -1.37
NEK3P51956 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NEK3P51956 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NEK3P51956 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NEK3P51956 VN1R12P-201ENST00000403778 876 ntBASIC6.49□□□□□ -1.37
NEK3P51956 RNA5SP198-201ENST00000410376 127 ntBASIC6.49□□□□□ -1.37
NEK3P51956 SNORA79B-201ENST00000410557 148 ntBASIC6.49□□□□□ -1.37
NEK3P51956 AL445213.1-201ENST00000412589 747 ntBASIC6.49□□□□□ -1.37
NEK3P51956 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
NEK3P51956 TATDN1P1-201ENST00000414123 891 ntBASIC6.49□□□□□ -1.37
NEK3P51956 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC6.49□□□□□ -1.37
NEK3P51956 OSTCP4-201ENST00000424397 449 ntBASIC6.49□□□□□ -1.37
NEK3P51956 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC6.49□□□□□ -1.37
NEK3P51956 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.49□□□□□ -1.37
NEK3P51956 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC6.49□□□□□ -1.37
NEK3P51956 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC6.49□□□□□ -1.37
NEK3P51956 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NEK3P51956 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.49□□□□□ -1.37
NEK3P51956 SNX18P26-201ENST00000458433 740 ntBASIC6.49□□□□□ -1.37
NEK3P51956 AC104339.1-201ENST00000465478 348 ntBASIC6.49□□□□□ -1.37
NEK3P51956 AC117394.1-201ENST00000477323 567 ntBASIC6.49□□□□□ -1.37
NEK3P51956 AC015908.1-201ENST00000478739 476 ntBASIC6.49□□□□□ -1.37
NEK3P51956 AC008410.1-201ENST00000483777 339 ntBASIC6.49□□□□□ -1.37
NEK3P51956 AC022206.1-201ENST00000495947 347 ntBASIC6.49□□□□□ -1.37
NEK3P51956 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NEK3P51956 AC112484.3-201ENST00000505910 329 ntBASIC6.49□□□□□ -1.37
NEK3P51956 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.49□□□□□ -1.37
NEK3P51956 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC6.49□□□□□ -1.37
NEK3P51956 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NEK3P51956 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.49□□□□□ -1.37
NEK3P51956 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.49□□□□□ -1.37
NEK3P51956 AL078601.3-201ENST00000573303 535 ntBASIC6.49□□□□□ -1.37
NEK3P51956 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.49□□□□□ -1.37
NEK3P51956 MIR4271-201ENST00000582451 67 ntBASIC6.49□□□□□ -1.37
NEK3P51956 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
NEK3P51956 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.49□□□□□ -1.37
NEK3P51956 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.49□□□□□ -1.37
NEK3P51956 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.49□□□□□ -1.37
NEK3P51956 AC092953.2-201ENST00000608000 699 ntBASIC6.49□□□□□ -1.37
NEK3P51956 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.49□□□□□ -1.37
NEK3P51956 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.49□□□□□ -1.37
NEK3P51956 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NEK3P51956 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
NEK3P51956 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NEK3P51956 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.49□□□□□ -1.37
NEK3P51956 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
NEK3P51956 SAGE3P-201ENST00000619800 1635 ntBASIC6.49□□□□□ -1.37
NEK3P51956 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
NEK3P51956 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NEK3P51956 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
NEK3P51956 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
NEK3P51956 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
NEK3P51956 AL359715.4-201ENST00000606629 1436 ntBASIC6.49□□□□□ -1.37
NEK3P51956 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.49□□□□□ -1.37
NEK3P51956 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
NEK3P51956 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.48□□□□□ -1.37
NEK3P51956 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.48□□□□□ -1.37
NEK3P51956 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NEK3P51956 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
NEK3P51956 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.48□□□□□ -1.37
NEK3P51956 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NEK3P51956 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.48□□□□□ -1.37
NEK3P51956 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.48□□□□□ -1.37
NEK3P51956 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NEK3P51956 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NEK3P51956 CASC19-246ENST00000641625 1606 ntBASIC6.48□□□□□ -1.37
NEK3P51956 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NEK3P51956 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NEK3P51956 SNORD35A-201ENST00000363389 86 ntBASIC6.48□□□□□ -1.37
NEK3P51956 MIR621-201ENST00000384919 96 ntBASIC6.48□□□□□ -1.37
NEK3P51956 MIR188-201ENST00000385034 86 ntBASIC6.48□□□□□ -1.37
NEK3P51956 RN7SKP281-201ENST00000410472 352 ntBASIC6.48□□□□□ -1.37
NEK3P51956 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC6.48□□□□□ -1.37
NEK3P51956 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.48□□□□□ -1.37
NEK3P51956 HMGA1P8-201ENST00000414130 321 ntBASIC6.48□□□□□ -1.37
NEK3P51956 GTF3AP1-201ENST00000416942 1004 ntBASIC6.48□□□□□ -1.37
NEK3P51956 CYP4F30P-202ENST00000420048 405 ntBASIC6.48□□□□□ -1.37
NEK3P51956 OR6K4P-201ENST00000423179 955 ntBASIC6.48□□□□□ -1.37
NEK3P51956 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.48□□□□□ -1.37
NEK3P51956 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.48□□□□□ -1.37
NEK3P51956 NDUFA5P10-201ENST00000432147 357 ntBASIC6.48□□□□□ -1.37
NEK3P51956 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.48□□□□□ -1.37
NEK3P51956 EMC3-AS1-205ENST00000438698 534 ntBASIC6.48□□□□□ -1.37
NEK3P51956 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC6.48□□□□□ -1.37
NEK3P51956 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.48□□□□□ -1.37
NEK3P51956 SLC25A51P1-201ENST00000468432 871 ntBASIC6.48□□□□□ -1.37
NEK3P51956 MTCO2P9-201ENST00000503214 694 ntBASIC6.48□□□□□ -1.37
NEK3P51956 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.48□□□□□ -1.37
NEK3P51956 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.48□□□□□ -1.37
NEK3P51956 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.48□□□□□ -1.37
NEK3P51956 RNA5SP441-201ENST00000516809 88 ntBASIC6.48□□□□□ -1.37
NEK3P51956 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NEK3P51956 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.48□□□□□ -1.37
NEK3P51956 AC008055.1-201ENST00000547032 609 ntBASIC6.48□□□□□ -1.37
NEK3P51956 AC025918.2-201ENST00000558683 763 ntBASIC6.48□□□□□ -1.37
NEK3P51956 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC6.48□□□□□ -1.37
NEK3P51956 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.48□□□□□ -1.37
NEK3P51956 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.48□□□□□ -1.37
NEK3P51956 AL583832.1-201ENST00000603227 784 ntBASIC6.48□□□□□ -1.37
NEK3P51956 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms