Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
COL8A2P25067 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL8A2P25067 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL8A2P25067 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL8A2P25067 CYP2AC1P-201ENST00000407830 1173 ntBASIC4.89□□□□□ -1.63
COL8A2P25067 RN7SKP293-201ENST00000411389 296 ntBASIC4.89□□□□□ -1.63
COL8A2P25067 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4.89□□□□□ -1.63
COL8A2P25067 OR2AT2P-201ENST00000413438 905 ntBASIC4.89□□□□□ -1.63
COL8A2P25067 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC4.89□□□□□ -1.63
COL8A2P25067 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.89□□□□□ -1.63
COL8A2P25067 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC4.89□□□□□ -1.63
COL8A2P25067 AC242426.1-201ENST00000435270 960 ntBASIC4.89□□□□□ -1.63
COL8A2P25067 GAPDHP48-201ENST00000436626 961 ntBASIC4.89□□□□□ -1.63
COL8A2P25067 EEF1B2P6-201ENST00000445713 673 ntBASIC4.89□□□□□ -1.63
COL8A2P25067 SETP4-201ENST00000455717 868 ntBASIC4.89□□□□□ -1.63
COL8A2P25067 RPSAP39-201ENST00000467439 883 ntBASIC4.89□□□□□ -1.63
COL8A2P25067 RPL38P3-201ENST00000484463 213 ntBASIC4.89□□□□□ -1.63
COL8A2P25067 RPL32P33-201ENST00000487023 394 ntBASIC4.89□□□□□ -1.63
COL8A2P25067 AL035690.1-201ENST00000490892 383 ntBASIC4.89□□□□□ -1.63
COL8A2P25067 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.89□□□□□ -1.63
COL8A2P25067 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC4.89□□□□□ -1.63
COL8A2P25067 AC074087.1-201ENST00000512059 724 ntBASIC4.89□□□□□ -1.63
COL8A2P25067 AC139365.2-201ENST00000517972 253 ntBASIC4.89□□□□□ -1.63
COL8A2P25067 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC4.89□□□□□ -1.63
COL8A2P25067 HMGB1P42-201ENST00000532126 553 ntBASIC4.89□□□□□ -1.63
COL8A2P25067 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.89□□□□□ -1.63
COL8A2P25067 AC010547.6-201ENST00000571789 193 ntBASIC4.89□□□□□ -1.63
COL8A2P25067 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.89□□□□□ -1.63
COL8A2P25067 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC4.89□□□□□ -1.63
COL8A2P25067 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.89□□□□□ -1.63
COL8A2P25067 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.89□□□□□ -1.63
COL8A2P25067 MIR6886-201ENST00000619864 61 ntBASIC4.89□□□□□ -1.63
COL8A2P25067 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
COL8A2P25067 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL8A2P25067 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL8A2P25067 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL8A2P25067 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL8A2P25067 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
COL8A2P25067 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL8A2P25067 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
COL8A2P25067 AC007842.1-201ENST00000597336 2039 ntBASIC4.89□□□□□ -1.63
COL8A2P25067 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL8A2P25067 AP004607.3-201ENST00000530354 3915 ntBASIC4.89□□□□□ -1.63
COL8A2P25067 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC4.88□□□□□ -1.63
COL8A2P25067 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
COL8A2P25067 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL8A2P25067 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COL8A2P25067 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL8A2P25067 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC4.88□□□□□ -1.63
COL8A2P25067 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC4.88□□□□□ -1.63
COL8A2P25067 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL8A2P25067 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL8A2P25067 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
COL8A2P25067 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
COL8A2P25067 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC4.88□□□□□ -1.63
COL8A2P25067 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
COL8A2P25067 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
COL8A2P25067 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL8A2P25067 ATP5A1P4-201ENST00000556888 1605 ntBASIC4.88□□□□□ -1.63
COL8A2P25067 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
COL8A2P25067 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC4.88□□□□□ -1.63
COL8A2P25067 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL8A2P25067 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL8A2P25067 RNA5SP46-201ENST00000362370 120 ntBASIC4.88□□□□□ -1.63
COL8A2P25067 SNORA64.1-201ENST00000362600 132 ntBASIC4.88□□□□□ -1.63
COL8A2P25067 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC4.88□□□□□ -1.63
COL8A2P25067 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL8A2P25067 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC4.88□□□□□ -1.63
COL8A2P25067 AC005522.1-201ENST00000395416 346 ntBASIC4.88□□□□□ -1.63
COL8A2P25067 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL8A2P25067 AL357752.1-201ENST00000412817 349 ntBASIC4.88□□□□□ -1.63
COL8A2P25067 NME1P1-201ENST00000420914 382 ntBASIC4.88□□□□□ -1.63
COL8A2P25067 Z84478.1-201ENST00000438230 1219 ntBASIC4.88□□□□□ -1.63
COL8A2P25067 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC4.88□□□□□ -1.63
COL8A2P25067 AL445687.2-201ENST00000458156 728 ntBASIC4.88□□□□□ -1.63
COL8A2P25067 RNU1-88P-201ENST00000459274 128 ntBASIC4.88□□□□□ -1.63
COL8A2P25067 AL355032.1-201ENST00000472981 438 ntBASIC4.88□□□□□ -1.63
COL8A2P25067 AC022215.1-201ENST00000481770 362 ntBASIC4.88□□□□□ -1.63
COL8A2P25067 AC009120.1-201ENST00000493458 473 ntBASIC4.88□□□□□ -1.63
COL8A2P25067 AL136038.1-201ENST00000497246 351 ntBASIC4.88□□□□□ -1.63
COL8A2P25067 RN7SL284P-201ENST00000498823 275 ntBASIC4.88□□□□□ -1.63
COL8A2P25067 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.88□□□□□ -1.63
COL8A2P25067 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC4.88□□□□□ -1.63
COL8A2P25067 RNU6-615P-201ENST00000516065 106 ntBASIC4.88□□□□□ -1.63
COL8A2P25067 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.88□□□□□ -1.63
COL8A2P25067 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL8A2P25067 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.88□□□□□ -1.63
COL8A2P25067 DPPA2P4-201ENST00000563717 878 ntBASIC4.88□□□□□ -1.63
COL8A2P25067 AC007346.2-201ENST00000564816 892 ntBASIC4.88□□□□□ -1.63
COL8A2P25067 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
COL8A2P25067 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.88□□□□□ -1.63
COL8A2P25067 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.88□□□□□ -1.63
COL8A2P25067 FO393422.1-201ENST00000603908 708 ntBASIC4.88□□□□□ -1.63
COL8A2P25067 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC4.88□□□□□ -1.63
COL8A2P25067 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.88□□□□□ -1.63
COL8A2P25067 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC4.88□□□□□ -1.63
COL8A2P25067 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC4.88□□□□□ -1.63
COL8A2P25067 AC009120.7-201ENST00000623452 780 ntBASIC4.88□□□□□ -1.63
COL8A2P25067 AL049767.1-202ENST00000637826 242 ntBASIC4.88□□□□□ -1.63
COL8A2P25067 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms