Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 SNORA70.9-201ENST00000384370 135 ntBASIC4.6□□□□□ -1.67
CD28P10747 RN7SKP293-201ENST00000411389 296 ntBASIC4.6□□□□□ -1.67
CD28P10747 AK4P4-201ENST00000419465 646 ntBASIC4.6□□□□□ -1.67
CD28P10747 MARK2P12-201ENST00000420129 585 ntBASIC4.6□□□□□ -1.67
CD28P10747 AC093155.2-201ENST00000420734 937 ntBASIC4.6□□□□□ -1.67
CD28P10747 AC127526.2-201ENST00000426436 775 ntBASIC4.6□□□□□ -1.67
CD28P10747 GAPDHP48-201ENST00000436626 961 ntBASIC4.6□□□□□ -1.67
CD28P10747 AC099521.1-201ENST00000482557 334 ntBASIC4.6□□□□□ -1.67
CD28P10747 CCDC11P1-201ENST00000503137 1162 ntBASIC4.6□□□□□ -1.67
CD28P10747 NENFP3-201ENST00000503735 313 ntBASIC4.6□□□□□ -1.67
CD28P10747 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CD28P10747 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CD28P10747 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC4.6□□□□□ -1.67
CD28P10747 HMGN2P36-201ENST00000529541 409 ntBASIC4.6□□□□□ -1.67
CD28P10747 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC4.6□□□□□ -1.67
CD28P10747 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC4.6□□□□□ -1.67
CD28P10747 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.6□□□□□ -1.67
CD28P10747 MIR4489-201ENST00000578869 62 ntBASIC4.6□□□□□ -1.67
CD28P10747 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC4.6□□□□□ -1.67
CD28P10747 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.6□□□□□ -1.67
CD28P10747 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.6□□□□□ -1.67
CD28P10747 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.6□□□□□ -1.67
CD28P10747 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.6□□□□□ -1.67
CD28P10747 ATM-229ENST00000639953 587 ntTSL 5 BASIC4.6□□□□□ -1.67
CD28P10747 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC4.6□□□□□ -1.67
CD28P10747 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CD28P10747 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC4.6□□□□□ -1.67
CD28P10747 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC4.6□□□□□ -1.67
CD28P10747 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CD28P10747 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC4.6□□□□□ -1.67
CD28P10747 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC4.6□□□□□ -1.67
CD28P10747 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CD28P10747 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC4.6□□□□□ -1.67
CD28P10747 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CD28P10747 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC4.6□□□□□ -1.67
CD28P10747 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CD28P10747 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CD28P10747 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CD28P10747 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC4.6□□□□□ -1.67
CD28P10747 AC016583.1-201ENST00000624221 2431 ntBASIC4.6□□□□□ -1.67
CD28P10747 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
CD28P10747 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CD28P10747 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC4.59□□□□□ -1.67
CD28P10747 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CD28P10747 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CD28P10747 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
CD28P10747 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CD28P10747 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
CD28P10747 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CD28P10747 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CD28P10747 RNA5SP514-201ENST00000363717 111 ntBASIC4.59□□□□□ -1.67
CD28P10747 RNA5SP394-201ENST00000364216 119 ntBASIC4.59□□□□□ -1.67
CD28P10747 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CD28P10747 RN7SKP29-201ENST00000410957 272 ntBASIC4.59□□□□□ -1.67
CD28P10747 PTCD2P2-201ENST00000415579 1095 ntBASIC4.59□□□□□ -1.67
CD28P10747 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC4.59□□□□□ -1.67
CD28P10747 RPS4XP5-201ENST00000419038 768 ntBASIC4.59□□□□□ -1.67
CD28P10747 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC4.59□□□□□ -1.67
CD28P10747 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.59□□□□□ -1.67
CD28P10747 AC099677.3-201ENST00000427081 395 ntBASIC4.59□□□□□ -1.67
CD28P10747 HMGB3P24-201ENST00000433260 622 ntBASIC4.59□□□□□ -1.67
CD28P10747 AC002504.1-201ENST00000438281 691 ntBASIC4.59□□□□□ -1.67
CD28P10747 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.59□□□□□ -1.67
CD28P10747 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC4.59□□□□□ -1.67
CD28P10747 EEF1B2P6-201ENST00000445713 673 ntBASIC4.59□□□□□ -1.67
CD28P10747 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC4.59□□□□□ -1.67
CD28P10747 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC4.59□□□□□ -1.67
CD28P10747 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CD28P10747 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4.59□□□□□ -1.67
CD28P10747 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CD28P10747 RPL23AP40-201ENST00000487630 390 ntBASIC4.59□□□□□ -1.67
CD28P10747 RN7SL629P-201ENST00000489622 285 ntBASIC4.59□□□□□ -1.67
CD28P10747 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CD28P10747 EIF3LP3-201ENST00000495197 822 ntBASIC4.59□□□□□ -1.67
CD28P10747 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
CD28P10747 ATP5LP3-201ENST00000514223 304 ntBASIC4.59□□□□□ -1.67
CD28P10747 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.59□□□□□ -1.67
CD28P10747 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC4.59□□□□□ -1.67
CD28P10747 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC4.59□□□□□ -1.67
CD28P10747 AC090022.1-201ENST00000546569 311 ntBASIC4.59□□□□□ -1.67
CD28P10747 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CD28P10747 LINC01616-201ENST00000561816 2280 ntBASIC4.59□□□□□ -1.67
CD28P10747 AC007494.1-201ENST00000562293 760 ntBASIC4.59□□□□□ -1.67
CD28P10747 AC007225.2-201ENST00000562529 256 ntBASIC4.59□□□□□ -1.67
CD28P10747 GARSP1-201ENST00000570895 719 ntBASIC4.59□□□□□ -1.67
CD28P10747 TXNP4-201ENST00000575018 310 ntBASIC4.59□□□□□ -1.67
CD28P10747 MIR4505-201ENST00000582238 73 ntBASIC4.59□□□□□ -1.67
CD28P10747 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CD28P10747 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
CD28P10747 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC4.59□□□□□ -1.67
CD28P10747 AL589674.2-201ENST00000604304 337 ntBASIC4.59□□□□□ -1.67
CD28P10747 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC4.59□□□□□ -1.67
CD28P10747 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC4.59□□□□□ -1.67
CD28P10747 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CD28P10747 AL139099.4-201ENST00000614802 114 ntBASIC4.59□□□□□ -1.67
CD28P10747 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC4.59□□□□□ -1.67
CD28P10747 AL691477.1-201ENST00000624398 162 ntBASIC4.59□□□□□ -1.67
CD28P10747 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC4.59□□□□□ -1.67
CD28P10747 AC087565.3-203ENST00000641018 837 ntBASIC4.59□□□□□ -1.67
CD28P10747 SAMMSON-210ENST00000641260 1308 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms