Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC022140.2-201ENST00000623500 188 ntBASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 AC018659.2-201ENST00000624690 715 ntBASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 AL392088.2-201ENST00000637607 285 ntBASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC8.92□□□□□ -0.98
CSB-PGBD3P0DP91 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 ZNF101P1-201ENST00000435701 1720 ntBASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 SNORA70.3-201ENST00000365075 132 ntBASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 TPT1-204ENST00000379060 764 ntTSL 5 BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 RNU2-17P-201ENST00000410290 190 ntBASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 EEF1B2P5-201ENST00000444820 548 ntBASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 PPIAP20-201ENST00000449839 135 ntBASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 MTCO2P18-201ENST00000457151 658 ntBASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 RN7SL254P-201ENST00000460609 284 ntBASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 RPSAP39-201ENST00000467439 883 ntBASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 RN7SL569P-201ENST00000494652 288 ntBASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 RPL24-206ENST00000495401 478 ntTSL 2 BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 RPL21P131-201ENST00000497298 483 ntBASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 GOLGA5P1-201ENST00000507317 980 ntBASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 MRPS33P3-201ENST00000513456 322 ntBASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 NPIPB14P-203ENST00000532298 987 ntBASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 OR4A21P-201ENST00000532759 944 ntBASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 GLYATL1P2-202ENST00000588046 902 ntBASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 CCDC58P3-201ENST00000590792 430 ntBASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 BMS1P7-201ENST00000602440 1052 ntBASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 AC125494.3-201ENST00000602759 455 ntBASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 AP003973.1-201ENST00000604639 691 ntBASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 AL356596.1-201ENST00000624230 379 ntBASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 AC123769.2-201ENST00000624332 5984 ntBASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 HSPD1P11-201ENST00000508643 1702 ntBASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
CSB-PGBD3P0DP91 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
CSB-PGBD3P0DP91 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
CSB-PGBD3P0DP91 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC8.9□□□□□ -0.98
CSB-PGBD3P0DP91 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
CSB-PGBD3P0DP91 AC005702.3-201ENST00000585345 1447 ntBASIC8.9□□□□□ -0.98
CSB-PGBD3P0DP91 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
CSB-PGBD3P0DP91 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC8.9□□□□□ -0.98
CSB-PGBD3P0DP91 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC8.9□□□□□ -0.98
CSB-PGBD3P0DP91 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
CSB-PGBD3P0DP91 SUCLA2P2-201ENST00000417269 1309 ntBASIC8.9□□□□□ -0.98
CSB-PGBD3P0DP91 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
CSB-PGBD3P0DP91 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC8.9□□□□□ -0.98
CSB-PGBD3P0DP91 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
CSB-PGBD3P0DP91 VTRNA3-1P-201ENST00000362552 102 ntBASIC8.9□□□□□ -0.98
CSB-PGBD3P0DP91 HMGB1P10-201ENST00000395823 563 ntBASIC8.9□□□□□ -0.98
CSB-PGBD3P0DP91 AL096711.1-201ENST00000404780 554 ntBASIC8.9□□□□□ -0.98
CSB-PGBD3P0DP91 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
CSB-PGBD3P0DP91 ATF1P1-201ENST00000406040 927 ntBASIC8.9□□□□□ -0.98
CSB-PGBD3P0DP91 AL133264.1-201ENST00000407157 562 ntBASIC8.9□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms