Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SPTA1P02549 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SPTA1P02549 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.33□□□□□ -1.56
SPTA1P02549 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SPTA1P02549 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
SPTA1P02549 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SPTA1P02549 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SPTA1P02549 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SPTA1P02549 GAPDHP42-201ENST00000406848 981 ntBASIC5.33□□□□□ -1.56
SPTA1P02549 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.33□□□□□ -1.56
SPTA1P02549 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.33□□□□□ -1.56
SPTA1P02549 USP9YP9-201ENST00000429406 715 ntBASIC5.33□□□□□ -1.56
SPTA1P02549 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.33□□□□□ -1.56
SPTA1P02549 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.33□□□□□ -1.56
SPTA1P02549 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.33□□□□□ -1.56
SPTA1P02549 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
SPTA1P02549 AC063949.1-201ENST00000552900 865 ntBASIC5.33□□□□□ -1.56
SPTA1P02549 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.33□□□□□ -1.56
SPTA1P02549 AL020997.2-201ENST00000602607 184 ntBASIC5.33□□□□□ -1.56
SPTA1P02549 AL513548.2-201ENST00000602994 1207 ntBASIC5.33□□□□□ -1.56
SPTA1P02549 AL392048.1-201ENST00000613946 534 ntBASIC5.33□□□□□ -1.56
SPTA1P02549 AC018628.1-201ENST00000624147 3819 ntBASIC5.33□□□□□ -1.56
SPTA1P02549 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
SPTA1P02549 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SPTA1P02549 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SPTA1P02549 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SPTA1P02549 GTF2IP4-201ENST00000453092 2054 ntBASIC5.33□□□□□ -1.56
SPTA1P02549 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SPTA1P02549 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SPTA1P02549 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SPTA1P02549 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SPTA1P02549 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SPTA1P02549 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SPTA1P02549 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SPTA1P02549 ARHGAP42P4-201ENST00000549782 2934 ntBASIC5.33□□□□□ -1.56
SPTA1P02549 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.33□□□□□ -1.56
SPTA1P02549 AC005297.1-201ENST00000444765 862 ntBASIC5.33□□□□□ -1.56
SPTA1P02549 AC073072.2-201ENST00000447425 348 ntBASIC5.33□□□□□ -1.56
SPTA1P02549 RN7SL570P-201ENST00000484405 292 ntBASIC5.33□□□□□ -1.56
SPTA1P02549 AC009120.1-201ENST00000493458 473 ntBASIC5.33□□□□□ -1.56
SPTA1P02549 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SPTA1P02549 BNIP3P1-201ENST00000547295 580 ntBASIC5.33□□□□□ -1.56
SPTA1P02549 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.33□□□□□ -1.56
SPTA1P02549 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.33□□□□□ -1.56
SPTA1P02549 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.33□□□□□ -1.56
SPTA1P02549 AC087783.2-201ENST00000605070 562 ntBASIC5.33□□□□□ -1.56
SPTA1P02549 PPATP2-201ENST00000605635 508 ntBASIC5.33□□□□□ -1.56
SPTA1P02549 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.33□□□□□ -1.56
SPTA1P02549 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SPTA1P02549 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
SPTA1P02549 AP004289.1-201ENST00000436307 2205 ntBASIC5.32□□□□□ -1.56
SPTA1P02549 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.32□□□□□ -1.56
SPTA1P02549 ZNF493-201ENST00000339914 1665 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SPTA1P02549 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
SPTA1P02549 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
SPTA1P02549 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
SPTA1P02549 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SPTA1P02549 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SPTA1P02549 AL035555.1-201ENST00000404462 1790 ntBASIC5.32□□□□□ -1.56
SPTA1P02549 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.32□□□□□ -1.56
SPTA1P02549 HMGA1P8-201ENST00000414130 321 ntBASIC5.32□□□□□ -1.56
SPTA1P02549 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.32□□□□□ -1.56
SPTA1P02549 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.32□□□□□ -1.56
SPTA1P02549 CYCSP12-201ENST00000437729 300 ntBASIC5.32□□□□□ -1.56
SPTA1P02549 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.32□□□□□ -1.56
SPTA1P02549 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SPTA1P02549 WBP1LP8-201ENST00000617401 327 ntBASIC5.32□□□□□ -1.56
SPTA1P02549 AC027348.2-201ENST00000624375 642 ntBASIC5.32□□□□□ -1.56
SPTA1P02549 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.32□□□□□ -1.56
SPTA1P02549 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
SPTA1P02549 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SPTA1P02549 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC5.32□□□□□ -1.56
SPTA1P02549 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SPTA1P02549 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SPTA1P02549 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC5.32□□□□□ -1.56
SPTA1P02549 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SPTA1P02549 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.32□□□□□ -1.56
SPTA1P02549 AL034546.1-201ENST00000623740 3693 ntBASIC5.32□□□□□ -1.56
SPTA1P02549 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SPTA1P02549 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
SPTA1P02549 RPL35AP24-201ENST00000413846 330 ntBASIC5.32□□□□□ -1.56
SPTA1P02549 AL713922.1-201ENST00000416477 747 ntBASIC5.32□□□□□ -1.56
SPTA1P02549 AL133325.1-201ENST00000421090 382 ntBASIC5.32□□□□□ -1.56
SPTA1P02549 AC099677.3-201ENST00000427081 395 ntBASIC5.32□□□□□ -1.56
SPTA1P02549 AC011753.3-201ENST00000443436 406 ntBASIC5.32□□□□□ -1.56
SPTA1P02549 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.32□□□□□ -1.56
SPTA1P02549 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.32□□□□□ -1.56
SPTA1P02549 AC016027.4-201ENST00000450866 277 ntBASIC5.32□□□□□ -1.56
SPTA1P02549 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.32□□□□□ -1.56
SPTA1P02549 RPS3AP41-201ENST00000462701 778 ntBASIC5.32□□□□□ -1.56
SPTA1P02549 RN7SL481P-201ENST00000477764 299 ntBASIC5.32□□□□□ -1.56
SPTA1P02549 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.32□□□□□ -1.56
SPTA1P02549 HMGB1P42-201ENST00000532126 553 ntBASIC5.32□□□□□ -1.56
SPTA1P02549 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.32□□□□□ -1.56
SPTA1P02549 MIR6780A-201ENST00000615089 68 ntBASIC5.32□□□□□ -1.56
SPTA1P02549 AC012653.2-201ENST00000621880 420 ntBASIC5.32□□□□□ -1.56
SPTA1P02549 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.32□□□□□ -1.56
SPTA1P02549 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC5.32□□□□□ -1.56
SPTA1P02549 AC016251.2-201ENST00000623393 3089 ntBASIC5.31□□□□□ -1.56
SPTA1P02549 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms