Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 SUMO2P7-201ENST00000511179 285 ntBASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 AC027338.1-201ENST00000514840 825 ntBASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 MTND2P38-201ENST00000522536 667 ntBASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 IGHV1-14-201ENST00000523391 241 ntBASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 TRIM77BP-201ENST00000524985 1119 ntBASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 LDHC-203ENST00000535809 757 ntTSL 5 BASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 LDHC-205ENST00000537486 583 ntTSL 5 BASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 WDR61-205ENST00000558459 884 ntTSL 3 BASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 AL158050.2-201ENST00000605336 568 ntBASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 RNU6-84P-201ENST00000607737 102 ntBASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 AC009032.1-201ENST00000617574 431 ntBASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 AC010608.3-201ENST00000625048 527 ntBASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 AP000550.3-201ENST00000637734 379 ntBASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 WBP11P1-201ENST00000562560 1931 ntBASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CTDP1Q9Y5B0 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 AC013488.1-201ENST00000526618 1838 ntBASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 AL442128.2-201ENST00000620246 1824 ntBASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 AL133243.2-201ENST00000610331 1621 ntBASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 TNPO1P2-201ENST00000426249 2665 ntBASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 SNORA21-201ENST00000362423 132 ntBASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 RNA5SP510-201ENST00000364697 99 ntBASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 CRP-204ENST00000368112 787 ntTSL 2 BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 AF228730.1-201ENST00000397972 663 ntBASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 U3.43-201ENST00000410734 213 ntBASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 UBE2V1P14-201ENST00000415815 558 ntBASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 RPS3P2-201ENST00000421346 701 ntBASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 NDUFA5P1-201ENST00000433858 341 ntBASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 MTND2P30-201ENST00000456663 382 ntBASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 RPS3AP15-201ENST00000483874 781 ntBASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 AC105233.1-201ENST00000498840 781 ntBASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 AC025458.1-201ENST00000506046 166 ntBASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 IGKV3D-25-201ENST00000519599 235 ntBASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 AC068339.2-201ENST00000534395 618 ntBASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 AC007956.1-201ENST00000555623 542 ntBASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 SNORA35B-201ENST00000607417 129 ntBASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 AC006453.5-201ENST00000636451 619 ntBASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 151.6 ms