Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC8.15□□□□□ -1.1
HLA-CQ95604 SDCBPP2-201ENST00000424643 885 ntBASIC8.15□□□□□ -1.1
HLA-CQ95604 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC8.15□□□□□ -1.1
HLA-CQ95604 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC8.15□□□□□ -1.1
HLA-CQ95604 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC8.15□□□□□ -1.1
HLA-CQ95604 OR7E62P-201ENST00000456741 477 ntBASIC8.15□□□□□ -1.1
HLA-CQ95604 VN1R6P-201ENST00000458417 907 ntBASIC8.15□□□□□ -1.1
HLA-CQ95604 RN7SL55P-201ENST00000464534 297 ntBASIC8.15□□□□□ -1.1
HLA-CQ95604 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC8.15□□□□□ -1.1
HLA-CQ95604 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC8.15□□□□□ -1.1
HLA-CQ95604 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC8.15□□□□□ -1.1
HLA-CQ95604 SNORA19.2-201ENST00000516013 114 ntBASIC8.15□□□□□ -1.1
HLA-CQ95604 RNU6-1334P-201ENST00000516032 105 ntBASIC8.15□□□□□ -1.1
HLA-CQ95604 snoU109.5-201ENST00000516231 132 ntBASIC8.15□□□□□ -1.1
HLA-CQ95604 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC8.15□□□□□ -1.1
HLA-CQ95604 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC8.15□□□□□ -1.1
HLA-CQ95604 AP001189.2-201ENST00000527320 189 ntBASIC8.15□□□□□ -1.1
HLA-CQ95604 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC8.15□□□□□ -1.1
HLA-CQ95604 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC8.15□□□□□ -1.1
HLA-CQ95604 AC089984.3-201ENST00000552838 363 ntBASIC8.15□□□□□ -1.1
HLA-CQ95604 AC078814.3-201ENST00000553036 491 ntBASIC8.15□□□□□ -1.1
HLA-CQ95604 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC8.15□□□□□ -1.1
HLA-CQ95604 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC8.15□□□□□ -1.1
HLA-CQ95604 AC015917.1-201ENST00000579654 510 ntBASIC8.15□□□□□ -1.1
HLA-CQ95604 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC8.15□□□□□ -1.1
HLA-CQ95604 RN7SL66P-201ENST00000582099 264 ntBASIC8.15□□□□□ -1.1
HLA-CQ95604 AC061975.3-201ENST00000583209 244 ntBASIC8.15□□□□□ -1.1
HLA-CQ95604 NRBF2P1-201ENST00000587407 859 ntBASIC8.15□□□□□ -1.1
HLA-CQ95604 AL162413.1-201ENST00000603198 110 ntBASIC8.15□□□□□ -1.1
HLA-CQ95604 U1.22-201ENST00000605806 164 ntBASIC8.15□□□□□ -1.1
HLA-CQ95604 BX323046.1-201ENST00000610145 535 ntBASIC8.15□□□□□ -1.1
HLA-CQ95604 AC006335.3-201ENST00000613408 292 ntBASIC8.15□□□□□ -1.1
HLA-CQ95604 ACACA-232ENST00000614438 569 ntTSL 2 BASIC8.15□□□□□ -1.1
HLA-CQ95604 TEX46-203ENST00000622840 479 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
HLA-CQ95604 UQCRC2-213ENST00000630839 535 ntTSL 4 BASIC8.15□□□□□ -1.1
HLA-CQ95604 MEF2C-229ENST00000627659 2393 ntTSL 5 BASIC8.15□□□□□ -1.1
HLA-CQ95604 SRSF10-204ENST00000344989 3487 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
HLA-CQ95604 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
HLA-CQ95604 TTC6-203ENST00000476979 2253 ntTSL 2 BASIC8.15□□□□□ -1.1
HLA-CQ95604 PMS2CL-204ENST00000486256 3327 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
HLA-CQ95604 BRCA1-208ENST00000468300 3273 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
HLA-CQ95604 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC8.15□□□□□ -1.11
HLA-CQ95604 AC093616.1-201ENST00000427434 2095 ntBASIC8.15□□□□□ -1.11
HLA-CQ95604 GNA12-203ENST00000407904 3918 ntTSL 2 BASIC8.15□□□□□ -1.11
HLA-CQ95604 BCO2-201ENST00000357685 2930 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
HLA-CQ95604 ERVMER34-1-202ENST00000443173 3830 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.11
HLA-CQ95604 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
HLA-CQ95604 UGT2B28-201ENST00000335568 1833 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
HLA-CQ95604 UGT2B4-206ENST00000512583 1836 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
HLA-CQ95604 AL356289.3-201ENST00000640049 2669 ntBASIC8.15□□□□□ -1.11
HLA-CQ95604 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC8.15□□□□□ -1.11
HLA-CQ95604 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
HLA-CQ95604 AC007012.2-201ENST00000623206 1676 ntBASIC8.14□□□□□ -1.11
HLA-CQ95604 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-CQ95604 NFRKB-202ENST00000524746 4114 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
HLA-CQ95604 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-CQ95604 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC8.14□□□□□ -1.11
HLA-CQ95604 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-CQ95604 SLC6A2-206ENST00000567238 3160 ntTSL 2 BASIC8.14□□□□□ -1.11
HLA-CQ95604 NR2F1-AS1-208ENST00000606233 2264 ntTSL 2 BASIC8.14□□□□□ -1.11
HLA-CQ95604 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-CQ95604 ZNF702P-201ENST00000270443 2990 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-CQ95604 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-CQ95604 IST1-226ENST00000606369 3583 ntTSL 2 BASIC8.14□□□□□ -1.11
HLA-CQ95604 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-CQ95604 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-CQ95604 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC8.14□□□□□ -1.11
HLA-CQ95604 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-CQ95604 LINC02102-201ENST00000503989 3364 ntTSL 2 BASIC8.14□□□□□ -1.11
HLA-CQ95604 AC107982.1-201ENST00000507171 1300 ntBASIC8.14□□□□□ -1.11
HLA-CQ95604 AC063949.2-201ENST00000508671 1968 ntTSL 2 BASIC8.14□□□□□ -1.11
HLA-CQ95604 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-CQ95604 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-CQ95604 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC8.14□□□□□ -1.11
HLA-CQ95604 LINC01358-207ENST00000634502 2575 ntTSL 5 BASIC8.14□□□□□ -1.11
HLA-CQ95604 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
HLA-CQ95604 Y_RNA.86-201ENST00000363020 111 ntBASIC8.14□□□□□ -1.11
HLA-CQ95604 Y_RNA.97-201ENST00000363094 102 ntBASIC8.14□□□□□ -1.11
HLA-CQ95604 SNORA73B-201ENST00000363217 204 ntBASIC8.14□□□□□ -1.11
HLA-CQ95604 AL450124.1-201ENST00000376401 353 ntBASIC8.14□□□□□ -1.11
HLA-CQ95604 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-CQ95604 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
HLA-CQ95604 ATP5J2-203ENST00000394186 305 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
HLA-CQ95604 AL034403.1-201ENST00000399414 885 ntBASIC8.14□□□□□ -1.11
HLA-CQ95604 VIM2P-201ENST00000402383 1294 ntBASIC8.14□□□□□ -1.11
HLA-CQ95604 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC8.14□□□□□ -1.11
HLA-CQ95604 RPS7P8-201ENST00000418311 581 ntBASIC8.14□□□□□ -1.11
HLA-CQ95604 SKP1P3-201ENST00000429280 487 ntBASIC8.14□□□□□ -1.11
HLA-CQ95604 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC8.14□□□□□ -1.11
HLA-CQ95604 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC8.14□□□□□ -1.11
HLA-CQ95604 TAAR7P-201ENST00000436141 242 ntBASIC8.14□□□□□ -1.11
HLA-CQ95604 RPL12P11-201ENST00000439970 501 ntBASIC8.14□□□□□ -1.11
HLA-CQ95604 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC8.14□□□□□ -1.11
HLA-CQ95604 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC8.14□□□□□ -1.11
HLA-CQ95604 Z80107.2-201ENST00000445127 392 ntBASIC8.14□□□□□ -1.11
HLA-CQ95604 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-CQ95604 COX6CP18-201ENST00000448769 222 ntBASIC8.14□□□□□ -1.11
HLA-CQ95604 AL356311.1-201ENST00000451697 258 ntTSL 3 BASIC8.14□□□□□ -1.11
HLA-CQ95604 RN7SL790P-201ENST00000474043 298 ntBASIC8.14□□□□□ -1.11
HLA-CQ95604 AC084878.1-201ENST00000480555 648 ntBASIC8.14□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms