Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AC019055.1-201ENST00000432822 443 ntTSL 3 BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 BZW1P1-201ENST00000454901 1240 ntBASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 RPL7P32-201ENST00000457119 744 ntBASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 RN7SL706P-201ENST00000460079 292 ntBASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 RPSAP24-201ENST00000461543 873 ntBASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 AC025271.1-201ENST00000485045 429 ntBASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 AC114981.1-201ENST00000503897 678 ntBASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 RPL7L1P7-201ENST00000509986 724 ntBASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 AF235103.2-201ENST00000525753 346 ntBASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 DEFB130C-202ENST00000530001 230 ntBASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 PDCL3P1-201ENST00000534575 734 ntBASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 AP000619.3-201ENST00000535634 1127 ntBASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 NXPE2P1-201ENST00000543705 726 ntBASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 AC093524.1-201ENST00000564266 1094 ntBASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 ARGFXP2-201ENST00000579304 949 ntBASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 AC100830.2-201ENST00000581636 240 ntBASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 ACTR3BP1-201ENST00000605584 1247 ntBASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 AL121782.1-201ENST00000611242 413 ntBASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 AC005899.6-201ENST00000620729 297 ntBASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 AC007342.8-201ENST00000623278 678 ntBASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 DGKB-205ENST00000406247 3257 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 AC007388.1-201ENST00000426083 1438 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 AC079061.1-201ENST00000499579 3075 ntTSL 2 BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 NLRP8-202ENST00000590542 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 AL022163.1-201ENST00000430261 1569 ntBASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 LDB3-201ENST00000263066 3873 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 AL136985.3-201ENST00000637377 2219 ntTSL 5 BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 MITF-203ENST00000328528 4680 ntTSL 5 BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 SPRY1-202ENST00000394339 2504 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 AKAP3-201ENST00000228850 3339 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 AC079097.1-201ENST00000512187 1399 ntBASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 AL136146.1-201ENST00000529830 1667 ntBASIC7.83□□□□□ -1.16
NPAS3Q8IXF0 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 IL31RA-205ENST00000396836 2426 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 ZNF45-204ENST00000589703 2409 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 AL512310.3-201ENST00000547023 1335 ntBASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 AL929601.4-201ENST00000613011 1341 ntBASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 SLC2A3P4-201ENST00000521259 1471 ntBASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 ANKS1B-215ENST00000549493 3328 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 AGR2-203ENST00000419304 1778 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 CAST-222ENST00000508579 1758 ntTSL 2 BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 KIAA1217-201ENST00000307544 3281 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 BBS12-203ENST00000542236 3431 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 C1orf87-201ENST00000371201 2028 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 RNU6-505P-201ENST00000384427 107 ntBASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 Y_RNA.605-201ENST00000410577 105 ntBASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 AC074117.1-203ENST00000412749 399 ntTSL 3 BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 AC004986.1-201ENST00000414855 607 ntBASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 TRGV5P-201ENST00000419915 354 ntBASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 AL592293.2-201ENST00000422292 996 ntBASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 ANXA2P2-201ENST00000435128 1020 ntBASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 TMX2P1-201ENST00000436507 708 ntBASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 RPS4XP4-201ENST00000443195 763 ntBASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 AL356133.1-201ENST00000444762 372 ntBASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 ARPC3P5-201ENST00000448802 534 ntBASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 RBMY2EP-202ENST00000456360 940 ntBASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 GUCY2GP-201ENST00000479705 3222 ntBASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 OR5M14P-201ENST00000506803 618 ntBASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms