Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 AC003985.2-201ENST00000562268 1669 ntBASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 RN7SKP184-201ENST00000362348 333 ntBASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 AL034417.1-201ENST00000399343 800 ntBASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 YWHAZP6-201ENST00000399764 738 ntBASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 RNA5SP431-201ENST00000410312 120 ntBASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 AL035422.1-201ENST00000414193 397 ntBASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 RPSAP65-201ENST00000429660 595 ntBASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 AL445928.1-201ENST00000435545 222 ntBASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 GAPDHP59-201ENST00000435908 267 ntBASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 AC073072.2-201ENST00000447425 348 ntBASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 RN7SL254P-201ENST00000460609 284 ntBASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 AC112484.3-201ENST00000505910 329 ntBASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 FTH1P11-201ENST00000517577 551 ntBASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 AC090826.1-203ENST00000569235 490 ntBASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 AL513327.3-201ENST00000602618 469 ntBASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 AC073389.3-201ENST00000609434 935 ntBASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 HTR1DP1-201ENST00000616500 888 ntBASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC50Q8IVM0 AP004607.3-201ENST00000530354 3915 ntBASIC6.15□□□□□ -1.43
CCDC50Q8IVM0 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
CCDC50Q8IVM0 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC50Q8IVM0 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC50Q8IVM0 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC50Q8IVM0 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.15□□□□□ -1.43
CCDC50Q8IVM0 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC50Q8IVM0 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC50Q8IVM0 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC50Q8IVM0 MAPK10-328ENST00000641553 4009 ntBASIC6.15□□□□□ -1.43
CCDC50Q8IVM0 AC012254.3-201ENST00000591183 2117 ntBASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 CRIP1P1-201ENST00000427567 185 ntBASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 AL353662.1-201ENST00000439099 327 ntBASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 AC023271.1-201ENST00000445936 1090 ntBASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 AL445466.1-201ENST00000448432 357 ntBASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 FRG2FP-204ENST00000453982 852 ntBASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 RPL12P39-201ENST00000455456 496 ntBASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 RN7SL72P-201ENST00000460697 269 ntBASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 RPS4XP12-201ENST00000461747 709 ntBASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 RN7SL362P-201ENST00000494228 267 ntBASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 AC006115.2-201ENST00000596823 202 ntBASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 AC096708.4-201ENST00000620563 552 ntBASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 FBXL21-201ENST00000297158 1305 ntBASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC50Q8IVM0 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms