Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.44□□□□□ -1.38
COPAP53621 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.44□□□□□ -1.38
COPAP53621 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COPAP53621 AL023284.3-201ENST00000407767 334 ntBASIC6.44□□□□□ -1.38
COPAP53621 TMA16P2-201ENST00000413187 601 ntBASIC6.44□□□□□ -1.38
COPAP53621 SEPT7P8-201ENST00000413308 775 ntBASIC6.44□□□□□ -1.38
COPAP53621 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6.44□□□□□ -1.38
COPAP53621 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.44□□□□□ -1.38
COPAP53621 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.44□□□□□ -1.38
COPAP53621 MGAT2P2-201ENST00000427194 797 ntBASIC6.44□□□□□ -1.38
COPAP53621 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COPAP53621 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.44□□□□□ -1.38
COPAP53621 FTLP19-201ENST00000433300 394 ntBASIC6.44□□□□□ -1.38
COPAP53621 AL590004.3-202ENST00000445883 451 ntBASIC6.44□□□□□ -1.38
COPAP53621 AC015908.1-201ENST00000478739 476 ntBASIC6.44□□□□□ -1.38
COPAP53621 NPM1P27-201ENST00000502784 830 ntBASIC6.44□□□□□ -1.38
COPAP53621 OR4D12P-201ENST00000509361 911 ntBASIC6.44□□□□□ -1.38
COPAP53621 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.44□□□□□ -1.38
COPAP53621 AC027338.1-201ENST00000514840 825 ntBASIC6.44□□□□□ -1.38
COPAP53621 RNU6-889P-201ENST00000517189 103 ntBASIC6.44□□□□□ -1.38
COPAP53621 RN7SKP35-201ENST00000517210 151 ntBASIC6.44□□□□□ -1.38
COPAP53621 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.44□□□□□ -1.38
COPAP53621 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.44□□□□□ -1.38
COPAP53621 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC6.44□□□□□ -1.38
COPAP53621 AC084337.1-201ENST00000524809 686 ntBASIC6.44□□□□□ -1.38
COPAP53621 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.44□□□□□ -1.38
COPAP53621 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.44□□□□□ -1.38
COPAP53621 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COPAP53621 AC090826.1-203ENST00000569235 490 ntBASIC6.44□□□□□ -1.38
COPAP53621 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC6.44□□□□□ -1.38
COPAP53621 AP005136.2-201ENST00000583253 1049 ntBASIC6.44□□□□□ -1.38
COPAP53621 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.44□□□□□ -1.38
COPAP53621 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.44□□□□□ -1.38
COPAP53621 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.44□□□□□ -1.38
COPAP53621 MIMT1-201ENST00000597105 1050 ntBASIC6.44□□□□□ -1.38
COPAP53621 AL136097.3-201ENST00000611097 505 ntBASIC6.44□□□□□ -1.38
COPAP53621 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6.44□□□□□ -1.38
COPAP53621 AP001962.1-201ENST00000624114 559 ntBASIC6.44□□□□□ -1.38
COPAP53621 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.44□□□□□ -1.38
COPAP53621 Z83820.1-201ENST00000456978 1499 ntBASIC6.44□□□□□ -1.38
COPAP53621 OR10AB1P-202ENST00000641219 1686 ntBASIC6.44□□□□□ -1.38
COPAP53621 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
COPAP53621 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
COPAP53621 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COPAP53621 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COPAP53621 TTC41P-205ENST00000551270 3963 ntBASIC6.44□□□□□ -1.38
COPAP53621 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COPAP53621 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC6.44□□□□□ -1.38
COPAP53621 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.44□□□□□ -1.38
COPAP53621 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.44□□□□□ -1.38
COPAP53621 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
COPAP53621 AL161912.4-201ENST00000623889 2468 ntBASIC6.43□□□□□ -1.38
COPAP53621 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
COPAP53621 AC125238.2-201ENST00000430003 1440 ntBASIC6.43□□□□□ -1.38
COPAP53621 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COPAP53621 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COPAP53621 AC245100.2-201ENST00000454544 1679 ntBASIC6.43□□□□□ -1.38
COPAP53621 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COPAP53621 AP005432.1-201ENST00000580891 3485 ntBASIC6.43□□□□□ -1.38
COPAP53621 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
COPAP53621 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
COPAP53621 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COPAP53621 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COPAP53621 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.43□□□□□ -1.38
COPAP53621 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COPAP53621 COX6B1P3-201ENST00000312310 260 ntBASIC6.43□□□□□ -1.38
COPAP53621 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
COPAP53621 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.43□□□□□ -1.38
COPAP53621 AC004386.1-201ENST00000393214 761 ntBASIC6.43□□□□□ -1.38
COPAP53621 ST13P16-201ENST00000401760 781 ntBASIC6.43□□□□□ -1.38
COPAP53621 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.43□□□□□ -1.38
COPAP53621 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.43□□□□□ -1.38
COPAP53621 SOCS5P1-201ENST00000440415 949 ntBASIC6.43□□□□□ -1.38
COPAP53621 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC6.43□□□□□ -1.38
COPAP53621 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.43□□□□□ -1.38
COPAP53621 AC009963.3-201ENST00000458090 486 ntBASIC6.43□□□□□ -1.38
COPAP53621 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC6.43□□□□□ -1.38
COPAP53621 AC094085.1-201ENST00000468914 584 ntBASIC6.43□□□□□ -1.38
COPAP53621 AK4P6-201ENST00000505168 528 ntBASIC6.43□□□□□ -1.38
COPAP53621 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.43□□□□□ -1.38
COPAP53621 IGKV3D-25-201ENST00000519599 235 ntBASIC6.43□□□□□ -1.38
COPAP53621 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.43□□□□□ -1.38
COPAP53621 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.43□□□□□ -1.38
COPAP53621 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC6.43□□□□□ -1.38
COPAP53621 MRPS21P8-201ENST00000569196 235 ntBASIC6.43□□□□□ -1.38
COPAP53621 AC126365.2-201ENST00000580630 379 ntBASIC6.43□□□□□ -1.38
COPAP53621 AC090616.1-201ENST00000583895 447 ntBASIC6.43□□□□□ -1.38
COPAP53621 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COPAP53621 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.43□□□□□ -1.38
COPAP53621 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.43□□□□□ -1.38
COPAP53621 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.43□□□□□ -1.38
COPAP53621 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.43□□□□□ -1.38
COPAP53621 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC6.43□□□□□ -1.38
COPAP53621 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.43□□□□□ -1.38
COPAP53621 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
COPAP53621 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COPAP53621 NEK2P2-201ENST00000438441 1338 ntBASIC6.43□□□□□ -1.38
COPAP53621 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COPAP53621 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COPAP53621 AC011369.2-201ENST00000624423 1567 ntBASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms