Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SRP9P49458 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SRP9P49458 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
SRP9P49458 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SRP9P49458 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SRP9P49458 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SRP9P49458 MRRFP1-201ENST00000435941 1675 ntBASIC5.19□□□□□ -1.58
SRP9P49458 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SRP9P49458 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.19□□□□□ -1.58
SRP9P49458 RNA5SP375-201ENST00000362975 119 ntBASIC5.19□□□□□ -1.58
SRP9P49458 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SRP9P49458 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.19□□□□□ -1.58
SRP9P49458 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SRP9P49458 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
SRP9P49458 RNU2-18P-201ENST00000411224 162 ntBASIC5.19□□□□□ -1.58
SRP9P49458 AC245096.1-201ENST00000413104 546 ntBASIC5.19□□□□□ -1.58
SRP9P49458 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.19□□□□□ -1.58
SRP9P49458 FTLP19-201ENST00000433300 394 ntBASIC5.19□□□□□ -1.58
SRP9P49458 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.19□□□□□ -1.58
SRP9P49458 AC097463.1-201ENST00000447288 481 ntBASIC5.19□□□□□ -1.58
SRP9P49458 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.19□□□□□ -1.58
SRP9P49458 AC104339.1-201ENST00000465478 348 ntBASIC5.19□□□□□ -1.58
SRP9P49458 AC098847.1-201ENST00000473094 348 ntBASIC5.19□□□□□ -1.58
SRP9P49458 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.19□□□□□ -1.58
SRP9P49458 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.19□□□□□ -1.58
SRP9P49458 CR383658.1-201ENST00000514609 734 ntBASIC5.19□□□□□ -1.58
SRP9P49458 RN7SKP288-201ENST00000516227 268 ntBASIC5.19□□□□□ -1.58
SRP9P49458 RNA5SP434-201ENST00000516647 121 ntBASIC5.19□□□□□ -1.58
SRP9P49458 AC011853.1-201ENST00000518911 454 ntBASIC5.19□□□□□ -1.58
SRP9P49458 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.19□□□□□ -1.58
SRP9P49458 AC009879.1-201ENST00000520029 839 ntBASIC5.19□□□□□ -1.58
SRP9P49458 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.19□□□□□ -1.58
SRP9P49458 AC024405.1-201ENST00000532521 1042 ntBASIC5.19□□□□□ -1.58
SRP9P49458 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.19□□□□□ -1.58
SRP9P49458 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.19□□□□□ -1.58
SRP9P49458 OR1E3-201ENST00000575608 948 ntBASIC5.19□□□□□ -1.58
SRP9P49458 MIR4701-201ENST00000583094 63 ntBASIC5.19□□□□□ -1.58
SRP9P49458 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.19□□□□□ -1.58
SRP9P49458 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.19□□□□□ -1.58
SRP9P49458 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.19□□□□□ -1.58
SRP9P49458 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.19□□□□□ -1.58
SRP9P49458 AC124916.2-201ENST00000604416 224 ntBASIC5.19□□□□□ -1.58
SRP9P49458 AL645933.2-201ENST00000606743 1207 ntBASIC5.19□□□□□ -1.58
SRP9P49458 RN7SL261P-201ENST00000613441 282 ntBASIC5.19□□□□□ -1.58
SRP9P49458 AL512652.1-201ENST00000619006 500 ntBASIC5.19□□□□□ -1.58
SRP9P49458 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SRP9P49458 AC073593.1-201ENST00000624500 411 ntBASIC5.19□□□□□ -1.58
SRP9P49458 SNX18P12-201ENST00000624821 759 ntBASIC5.19□□□□□ -1.58
SRP9P49458 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.19□□□□□ -1.58
SRP9P49458 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.19□□□□□ -1.58
SRP9P49458 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.19□□□□□ -1.58
SRP9P49458 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.19□□□□□ -1.58
SRP9P49458 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
SRP9P49458 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
SRP9P49458 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SRP9P49458 AP001029.2-203ENST00000589795 4910 ntBASIC5.19□□□□□ -1.58
SRP9P49458 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SRP9P49458 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SRP9P49458 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
SRP9P49458 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SRP9P49458 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SRP9P49458 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SRP9P49458 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SRP9P49458 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
SRP9P49458 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SRP9P49458 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
SRP9P49458 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SRP9P49458 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SRP9P49458 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SRP9P49458 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SRP9P49458 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SRP9P49458 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
SRP9P49458 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SRP9P49458 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SRP9P49458 RNU105B-201ENST00000364478 208 ntBASIC5.18□□□□□ -1.58
SRP9P49458 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.18□□□□□ -1.58
SRP9P49458 AC087752.1-201ENST00000391360 558 ntBASIC5.18□□□□□ -1.58
SRP9P49458 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SRP9P49458 VN1R12P-201ENST00000403778 876 ntBASIC5.18□□□□□ -1.58
SRP9P49458 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.18□□□□□ -1.58
SRP9P49458 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.18□□□□□ -1.58
SRP9P49458 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.18□□□□□ -1.58
SRP9P49458 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SRP9P49458 RBMY2AP-201ENST00000445405 1157 ntBASIC5.18□□□□□ -1.58
SRP9P49458 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.18□□□□□ -1.58
SRP9P49458 RBMY2CP-201ENST00000448575 1157 ntBASIC5.18□□□□□ -1.58
SRP9P49458 RBMY2DP-202ENST00000448881 1157 ntBASIC5.18□□□□□ -1.58
SRP9P49458 AC068491.1-201ENST00000449539 1241 ntBASIC5.18□□□□□ -1.58
SRP9P49458 RBMY2BP-202ENST00000451071 1156 ntBASIC5.18□□□□□ -1.58
SRP9P49458 AC092865.4-201ENST00000477936 615 ntBASIC5.18□□□□□ -1.58
SRP9P49458 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.18□□□□□ -1.58
SRP9P49458 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.18□□□□□ -1.58
SRP9P49458 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.18□□□□□ -1.58
SRP9P49458 FTH1P11-201ENST00000517577 551 ntBASIC5.18□□□□□ -1.58
SRP9P49458 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.18□□□□□ -1.58
SRP9P49458 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.18□□□□□ -1.58
SRP9P49458 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.18□□□□□ -1.58
SRP9P49458 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.18□□□□□ -1.58
SRP9P49458 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.18□□□□□ -1.58
SRP9P49458 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms