Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AL354718.1-201ENST00000619764 589 ntBASIC5.08□□□□□ -1.6
CDX1P47902 AC019080.5-201ENST00000624891 757 ntBASIC5.08□□□□□ -1.6
CDX1P47902 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.08□□□□□ -1.6
CDX1P47902 AL163152.1-201ENST00000642001 374 ntBASIC5.08□□□□□ -1.6
CDX1P47902 AC097063.1-201ENST00000426714 1797 ntBASIC5.08□□□□□ -1.6
CDX1P47902 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDX1P47902 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CDX1P47902 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CDX1P47902 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CDX1P47902 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.08□□□□□ -1.6
CDX1P47902 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
CDX1P47902 AC068870.3-201ENST00000625077 2536 ntBASIC5.07□□□□□ -1.6
CDX1P47902 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.07□□□□□ -1.6
CDX1P47902 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDX1P47902 DDX6P1-205ENST00000441966 1436 ntBASIC5.07□□□□□ -1.6
CDX1P47902 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDX1P47902 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDX1P47902 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDX1P47902 LINC01613-201ENST00000561476 2780 ntBASIC5.07□□□□□ -1.6
CDX1P47902 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CDX1P47902 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.07□□□□□ -1.6
CDX1P47902 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CDX1P47902 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDX1P47902 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDX1P47902 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDX1P47902 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CDX1P47902 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.07□□□□□ -1.6
CDX1P47902 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDX1P47902 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CDX1P47902 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CDX1P47902 GSTA12P-201ENST00000402398 508 ntBASIC5.07□□□□□ -1.6
CDX1P47902 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.07□□□□□ -1.6
CDX1P47902 AL121878.1-201ENST00000418638 859 ntBASIC5.07□□□□□ -1.6
CDX1P47902 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.07□□□□□ -1.6
CDX1P47902 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.07□□□□□ -1.6
CDX1P47902 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.07□□□□□ -1.6
CDX1P47902 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.07□□□□□ -1.6
CDX1P47902 MTND4LP7-201ENST00000431728 294 ntBASIC5.07□□□□□ -1.6
CDX1P47902 AC007563.3-201ENST00000433233 371 ntBASIC5.07□□□□□ -1.6
CDX1P47902 ZFAND6P1-201ENST00000434138 605 ntBASIC5.07□□□□□ -1.6
CDX1P47902 AC003989.1-201ENST00000434569 565 ntBASIC5.07□□□□□ -1.6
CDX1P47902 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.07□□□□□ -1.6
CDX1P47902 AC046176.1-201ENST00000435260 1170 ntBASIC5.07□□□□□ -1.6
CDX1P47902 AC010086.1-201ENST00000437359 1052 ntBASIC5.07□□□□□ -1.6
CDX1P47902 RPL5P25-201ENST00000441148 775 ntBASIC5.07□□□□□ -1.6
CDX1P47902 TIMM8BP2-201ENST00000445940 251 ntBASIC5.07□□□□□ -1.6
CDX1P47902 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.07□□□□□ -1.6
CDX1P47902 AC093664.1-201ENST00000511779 289 ntBASIC5.07□□□□□ -1.6
CDX1P47902 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.07□□□□□ -1.6
CDX1P47902 AC138832.1-201ENST00000522871 556 ntBASIC5.07□□□□□ -1.6
CDX1P47902 AC109635.6-201ENST00000525487 1113 ntBASIC5.07□□□□□ -1.6
CDX1P47902 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.07□□□□□ -1.6
CDX1P47902 AC023245.2-201ENST00000530760 2978 ntBASIC5.07□□□□□ -1.6
CDX1P47902 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
CDX1P47902 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.07□□□□□ -1.6
CDX1P47902 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.07□□□□□ -1.6
CDX1P47902 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.07□□□□□ -1.6
CDX1P47902 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.07□□□□□ -1.6
CDX1P47902 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDX1P47902 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDX1P47902 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.07□□□□□ -1.6
CDX1P47902 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDX1P47902 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.07□□□□□ -1.6
CDX1P47902 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.07□□□□□ -1.6
CDX1P47902 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.07□□□□□ -1.6
CDX1P47902 AC026898.1-201ENST00000586404 571 ntBASIC5.07□□□□□ -1.6
CDX1P47902 AC063977.7-201ENST00000594454 337 ntBASIC5.07□□□□□ -1.6
CDX1P47902 AL135786.2-201ENST00000608422 615 ntBASIC5.07□□□□□ -1.6
CDX1P47902 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.07□□□□□ -1.6
CDX1P47902 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.07□□□□□ -1.6
CDX1P47902 AC012676.3-201ENST00000614983 479 ntBASIC5.07□□□□□ -1.6
CDX1P47902 AC005393.1-201ENST00000617916 584 ntBASIC5.07□□□□□ -1.6
CDX1P47902 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CDX1P47902 AC018692.2-201ENST00000624130 348 ntBASIC5.07□□□□□ -1.6
CDX1P47902 RACK1-235ENST00000626067 564 ntTSL 2 BASIC5.07□□□□□ -1.6
CDX1P47902 AC073488.9-201ENST00000631601 754 ntBASIC5.07□□□□□ -1.6
CDX1P47902 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.07□□□□□ -1.6
CDX1P47902 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.07□□□□□ -1.6
CDX1P47902 AC010325.3-201ENST00000641084 394 ntBASIC5.07□□□□□ -1.6
CDX1P47902 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
CDX1P47902 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDX1P47902 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDX1P47902 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDX1P47902 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.07□□□□□ -1.6
CDX1P47902 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDX1P47902 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CDX1P47902 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDX1P47902 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
CDX1P47902 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
CDX1P47902 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDX1P47902 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDX1P47902 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDX1P47902 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.06□□□□□ -1.6
CDX1P47902 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.06□□□□□ -1.6
CDX1P47902 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDX1P47902 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDX1P47902 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CDX1P47902 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDX1P47902 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.06□□□□□ -1.6
CDX1P47902 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 145.7 ms