Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.55□□□□□ -1.52
SOX3P41225 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
SOX3P41225 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SOX3P41225 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.55□□□□□ -1.52
SOX3P41225 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.55□□□□□ -1.52
SOX3P41225 RBPJP7-201ENST00000442803 1447 ntBASIC5.55□□□□□ -1.52
SOX3P41225 RBPJP5-201ENST00000449433 1447 ntBASIC5.55□□□□□ -1.52
SOX3P41225 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.55□□□□□ -1.52
SOX3P41225 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SOX3P41225 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.55□□□□□ -1.52
SOX3P41225 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
SOX3P41225 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.55□□□□□ -1.52
SOX3P41225 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SOX3P41225 AC012254.3-201ENST00000591183 2117 ntBASIC5.54□□□□□ -1.52
SOX3P41225 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SOX3P41225 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SOX3P41225 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SOX3P41225 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SOX3P41225 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SOX3P41225 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SOX3P41225 OR7E25P-201ENST00000344844 931 ntBASIC5.54□□□□□ -1.52
SOX3P41225 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.54□□□□□ -1.52
SOX3P41225 CASKP1-201ENST00000412870 582 ntBASIC5.54□□□□□ -1.52
SOX3P41225 AL354890.1-201ENST00000413730 346 ntBASIC5.54□□□□□ -1.52
SOX3P41225 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.54□□□□□ -1.52
SOX3P41225 NMD3P2-201ENST00000421815 761 ntBASIC5.54□□□□□ -1.52
SOX3P41225 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.54□□□□□ -1.52
SOX3P41225 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.54□□□□□ -1.52
SOX3P41225 LDHAP2-201ENST00000437325 985 ntBASIC5.54□□□□□ -1.52
SOX3P41225 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.54□□□□□ -1.52
SOX3P41225 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.54□□□□□ -1.52
SOX3P41225 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SOX3P41225 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.54□□□□□ -1.52
SOX3P41225 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.54□□□□□ -1.52
SOX3P41225 RN7SL352P-201ENST00000466002 277 ntBASIC5.54□□□□□ -1.52
SOX3P41225 RN7SL269P-201ENST00000467795 305 ntBASIC5.54□□□□□ -1.52
SOX3P41225 RN7SL284P-201ENST00000498823 275 ntBASIC5.54□□□□□ -1.52
SOX3P41225 ST13P12-201ENST00000508958 1094 ntBASIC5.54□□□□□ -1.52
SOX3P41225 AC114781.3-201ENST00000512083 142 ntBASIC5.54□□□□□ -1.52
SOX3P41225 SETP21-201ENST00000514799 892 ntBASIC5.54□□□□□ -1.52
SOX3P41225 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.54□□□□□ -1.52
SOX3P41225 TPM3P3-201ENST00000521343 354 ntBASIC5.54□□□□□ -1.52
SOX3P41225 TRIM51DP-201ENST00000529746 596 ntBASIC5.54□□□□□ -1.52
SOX3P41225 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.54□□□□□ -1.52
SOX3P41225 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.54□□□□□ -1.52
SOX3P41225 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.54□□□□□ -1.52
SOX3P41225 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.54□□□□□ -1.52
SOX3P41225 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.54□□□□□ -1.52
SOX3P41225 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.54□□□□□ -1.52
SOX3P41225 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.54□□□□□ -1.52
SOX3P41225 AL353729.2-201ENST00000605859 1249 ntBASIC5.54□□□□□ -1.52
SOX3P41225 MIR6793-201ENST00000612376 63 ntBASIC5.54□□□□□ -1.52
SOX3P41225 AL021918.2-201ENST00000613415 194 ntBASIC5.54□□□□□ -1.52
SOX3P41225 AC069542.2-201ENST00000624816 216 ntBASIC5.54□□□□□ -1.52
SOX3P41225 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SOX3P41225 AC129915.3-201ENST00000634128 948 ntBASIC5.54□□□□□ -1.52
SOX3P41225 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SOX3P41225 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SOX3P41225 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SOX3P41225 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SOX3P41225 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.54□□□□□ -1.52
SOX3P41225 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
SOX3P41225 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.54□□□□□ -1.52
SOX3P41225 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SOX3P41225 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.53□□□□□ -1.52
SOX3P41225 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.53□□□□□ -1.52
SOX3P41225 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SOX3P41225 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SOX3P41225 AL592429.1-201ENST00000403909 1473 ntBASIC5.53□□□□□ -1.52
SOX3P41225 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SOX3P41225 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SOX3P41225 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
SOX3P41225 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
SOX3P41225 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SOX3P41225 AL591135.1-201ENST00000401578 5914 ntBASIC5.53□□□□□ -1.52
SOX3P41225 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SOX3P41225 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SOX3P41225 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SOX3P41225 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SOX3P41225 RPL35AP3-201ENST00000414680 288 ntBASIC5.53□□□□□ -1.52
SOX3P41225 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.53□□□□□ -1.52
SOX3P41225 RPS3P2-201ENST00000421346 701 ntBASIC5.53□□□□□ -1.52
SOX3P41225 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SOX3P41225 CDY8P-201ENST00000428380 1279 ntBASIC5.53□□□□□ -1.52
SOX3P41225 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.53□□□□□ -1.52
SOX3P41225 AC073410.1-201ENST00000435125 589 ntBASIC5.53□□□□□ -1.52
SOX3P41225 NDUFS5P5-201ENST00000437256 321 ntBASIC5.53□□□□□ -1.52
SOX3P41225 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.53□□□□□ -1.52
SOX3P41225 CDY20P-201ENST00000447528 1279 ntBASIC5.53□□□□□ -1.52
SOX3P41225 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.53□□□□□ -1.52
SOX3P41225 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.53□□□□□ -1.52
SOX3P41225 OR51A1P-201ENST00000511110 946 ntBASIC5.53□□□□□ -1.52
SOX3P41225 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SOX3P41225 AC136777.2-201ENST00000522979 358 ntBASIC5.53□□□□□ -1.52
SOX3P41225 WBP1LP3-201ENST00000523033 208 ntBASIC5.53□□□□□ -1.52
SOX3P41225 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.53□□□□□ -1.52
SOX3P41225 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SOX3P41225 AC110056.1-201ENST00000525759 911 ntBASIC5.53□□□□□ -1.52
SOX3P41225 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SOX3P41225 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms