Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 CKS1BP1-201ENST00000555221 240 ntBASIC5.84□□□□□ -1.47
CHMP24386 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.84□□□□□ -1.47
CHMP24386 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.84□□□□□ -1.47
CHMP24386 AC090651.1-201ENST00000567865 634 ntBASIC5.84□□□□□ -1.47
CHMP24386 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CHMP24386 AL589863.1-201ENST00000595383 631 ntBASIC5.84□□□□□ -1.47
CHMP24386 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.84□□□□□ -1.47
CHMP24386 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.84□□□□□ -1.47
CHMP24386 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.84□□□□□ -1.47
CHMP24386 WBP1LP12-201ENST00000604449 331 ntBASIC5.84□□□□□ -1.47
CHMP24386 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.84□□□□□ -1.47
CHMP24386 AC005828.7-201ENST00000607331 556 ntBASIC5.84□□□□□ -1.47
CHMP24386 AL591926.1-201ENST00000620542 217 ntBASIC5.84□□□□□ -1.47
CHMP24386 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CHMP24386 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CHMP24386 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.84□□□□□ -1.47
CHMP24386 SAGE3P-201ENST00000619800 1635 ntBASIC5.84□□□□□ -1.47
CHMP24386 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.48
CHMP24386 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
CHMP24386 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
CHMP24386 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
CHMP24386 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
CHMP24386 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHMP24386 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHMP24386 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHMP24386 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CHMP24386 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CHMP24386 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CHMP24386 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHMP24386 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CHMP24386 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.83□□□□□ -1.48
CHMP24386 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.83□□□□□ -1.48
CHMP24386 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHMP24386 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CHMP24386 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHMP24386 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CHMP24386 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CHMP24386 RNU11-201ENST00000387069 134 ntBASIC5.83□□□□□ -1.48
CHMP24386 AL356057.1-202ENST00000402263 756 ntBASIC5.83□□□□□ -1.48
CHMP24386 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.83□□□□□ -1.48
CHMP24386 AL590806.1-201ENST00000415818 853 ntBASIC5.83□□□□□ -1.48
CHMP24386 AC099782.1-201ENST00000425889 474 ntBASIC5.83□□□□□ -1.48
CHMP24386 RPL23AP4-201ENST00000427757 463 ntBASIC5.83□□□□□ -1.48
CHMP24386 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.83□□□□□ -1.48
CHMP24386 AC097359.1-201ENST00000447946 463 ntBASIC5.83□□□□□ -1.48
CHMP24386 AC017099.1-201ENST00000448261 1028 ntBASIC5.83□□□□□ -1.48
CHMP24386 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.83□□□□□ -1.48
CHMP24386 RPS27AP3-201ENST00000453803 454 ntBASIC5.83□□□□□ -1.48
CHMP24386 AC118758.1-202ENST00000454719 225 ntBASIC5.83□□□□□ -1.48
CHMP24386 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.83□□□□□ -1.48
CHMP24386 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.83□□□□□ -1.48
CHMP24386 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.83□□□□□ -1.48
CHMP24386 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.83□□□□□ -1.48
CHMP24386 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.83□□□□□ -1.48
CHMP24386 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.83□□□□□ -1.48
CHMP24386 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.83□□□□□ -1.48
CHMP24386 AC008055.1-201ENST00000547032 609 ntBASIC5.83□□□□□ -1.48
CHMP24386 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.83□□□□□ -1.48
CHMP24386 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.83□□□□□ -1.48
CHMP24386 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.83□□□□□ -1.48
CHMP24386 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHMP24386 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.83□□□□□ -1.48
CHMP24386 MIR4271-201ENST00000582451 67 ntBASIC5.83□□□□□ -1.48
CHMP24386 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.83□□□□□ -1.48
CHMP24386 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.83□□□□□ -1.48
CHMP24386 AL360012.1-201ENST00000602813 131 ntBASIC5.83□□□□□ -1.48
CHMP24386 AL021368.3-201ENST00000607119 578 ntBASIC5.83□□□□□ -1.48
CHMP24386 AC093388.1-201ENST00000609166 430 ntBASIC5.83□□□□□ -1.48
CHMP24386 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.83□□□□□ -1.48
CHMP24386 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.83□□□□□ -1.48
CHMP24386 MIR6811-201ENST00000620409 58 ntBASIC5.83□□□□□ -1.48
CHMP24386 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.83□□□□□ -1.48
CHMP24386 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CHMP24386 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CHMP24386 AC020633.1-201ENST00000468439 2247 ntBASIC5.83□□□□□ -1.48
CHMP24386 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.83□□□□□ -1.48
CHMP24386 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CHMP24386 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
CHMP24386 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CHMP24386 AC232271.1-201ENST00000602455 2715 ntBASIC5.83□□□□□ -1.48
CHMP24386 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.83□□□□□ -1.48
CHMP24386 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHMP24386 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHMP24386 AP002512.4-202ENST00000641599 4530 ntBASIC5.82□□□□□ -1.48
CHMP24386 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CHMP24386 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CHMP24386 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
CHMP24386 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
CHMP24386 AC125336.1-201ENST00000508893 2827 ntBASIC5.82□□□□□ -1.48
CHMP24386 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.82□□□□□ -1.48
CHMP24386 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
CHMP24386 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CHMP24386 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.82□□□□□ -1.48
CHMP24386 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
CHMP24386 RLIMP2-201ENST00000427891 1563 ntBASIC5.82□□□□□ -1.48
CHMP24386 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CHMP24386 AC087516.1-201ENST00000561236 2428 ntBASIC5.82□□□□□ -1.48
CHMP24386 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
CHMP24386 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CHMP24386 SNORD16-201ENST00000362803 99 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms