Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
TPM1P09493 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TPM1P09493 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.36□□□□□ -1.39
TPM1P09493 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
TPM1P09493 MAPK10-328ENST00000641553 4009 ntBASIC6.36□□□□□ -1.39
TPM1P09493 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TPM1P09493 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
TPM1P09493 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
TPM1P09493 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TPM1P09493 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
TPM1P09493 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TPM1P09493 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.36□□□□□ -1.39
TPM1P09493 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TPM1P09493 RNU1-136P-201ENST00000384181 164 ntBASIC6.36□□□□□ -1.39
TPM1P09493 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.36□□□□□ -1.39
TPM1P09493 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TPM1P09493 RPEP4-201ENST00000437636 602 ntBASIC6.36□□□□□ -1.39
TPM1P09493 AC015983.1-201ENST00000441577 373 ntBASIC6.36□□□□□ -1.39
TPM1P09493 AC245291.3-201ENST00000443400 292 ntBASIC6.36□□□□□ -1.39
TPM1P09493 AC234771.2-201ENST00000445718 597 ntBASIC6.36□□□□□ -1.39
TPM1P09493 RPS23P9-201ENST00000448848 438 ntBASIC6.36□□□□□ -1.39
TPM1P09493 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.36□□□□□ -1.39
TPM1P09493 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.36□□□□□ -1.39
TPM1P09493 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.36□□□□□ -1.39
TPM1P09493 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.36□□□□□ -1.39
TPM1P09493 FTH1P11-201ENST00000517577 551 ntBASIC6.36□□□□□ -1.39
TPM1P09493 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.36□□□□□ -1.39
TPM1P09493 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.36□□□□□ -1.39
TPM1P09493 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.36□□□□□ -1.39
TPM1P09493 AC012254.3-201ENST00000591183 2117 ntBASIC6.36□□□□□ -1.39
TPM1P09493 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.36□□□□□ -1.39
TPM1P09493 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TPM1P09493 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.36□□□□□ -1.39
TPM1P09493 AL139099.4-201ENST00000614802 114 ntBASIC6.36□□□□□ -1.39
TPM1P09493 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
TPM1P09493 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.36□□□□□ -1.39
TPM1P09493 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.36□□□□□ -1.39
TPM1P09493 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.36□□□□□ -1.39
TPM1P09493 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
TPM1P09493 OR4G1P-202ENST00000641173 1788 ntBASIC6.36□□□□□ -1.39
TPM1P09493 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.36□□□□□ -1.39
TPM1P09493 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TPM1P09493 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TPM1P09493 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
TPM1P09493 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TPM1P09493 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TPM1P09493 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
TPM1P09493 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
TPM1P09493 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.35□□□□□ -1.39
TPM1P09493 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TPM1P09493 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
TPM1P09493 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
TPM1P09493 MFSD8-239ENST00000641590 2479 ntBASIC6.35□□□□□ -1.39
TPM1P09493 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.35□□□□□ -1.39
TPM1P09493 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TPM1P09493 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.35□□□□□ -1.39
TPM1P09493 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
TPM1P09493 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
TPM1P09493 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TPM1P09493 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TPM1P09493 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.35□□□□□ -1.39
TPM1P09493 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.35□□□□□ -1.39
TPM1P09493 AL121878.1-201ENST00000418638 859 ntBASIC6.35□□□□□ -1.39
TPM1P09493 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.35□□□□□ -1.39
TPM1P09493 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.35□□□□□ -1.39
TPM1P09493 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.35□□□□□ -1.39
TPM1P09493 AC023245.1-201ENST00000468501 517 ntBASIC6.35□□□□□ -1.39
TPM1P09493 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.35□□□□□ -1.39
TPM1P09493 AP002453.1-201ENST00000492327 668 ntBASIC6.35□□□□□ -1.39
TPM1P09493 AC093325.1-201ENST00000508378 326 ntBASIC6.35□□□□□ -1.39
TPM1P09493 AC105384.2-201ENST00000508433 640 ntBASIC6.35□□□□□ -1.39
TPM1P09493 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.35□□□□□ -1.39
TPM1P09493 SLC25A51P2-201ENST00000535708 889 ntBASIC6.35□□□□□ -1.39
TPM1P09493 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TPM1P09493 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC6.35□□□□□ -1.39
TPM1P09493 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.35□□□□□ -1.39
TPM1P09493 AC092681.3-201ENST00000609463 678 ntBASIC6.35□□□□□ -1.39
TPM1P09493 AC089999.3-201ENST00000622440 577 ntBASIC6.35□□□□□ -1.39
TPM1P09493 AC016542.2-201ENST00000624201 619 ntBASIC6.35□□□□□ -1.39
TPM1P09493 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC6.35□□□□□ -1.39
TPM1P09493 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TPM1P09493 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
TPM1P09493 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TPM1P09493 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TPM1P09493 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.35□□□□□ -1.39
TPM1P09493 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TPM1P09493 AC112198.2-201ENST00000426589 6996 ntBASIC6.34□□□□□ -1.39
TPM1P09493 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
TPM1P09493 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
TPM1P09493 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
TPM1P09493 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC6.34□□□□□ -1.39
TPM1P09493 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
TPM1P09493 AC117409.1-201ENST00000470499 1310 ntBASIC6.34□□□□□ -1.39
TPM1P09493 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TPM1P09493 LINC01613-201ENST00000561476 2780 ntBASIC6.34□□□□□ -1.39
TPM1P09493 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TPM1P09493 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
TPM1P09493 AC092681.1-201ENST00000297369 291 ntBASIC6.34□□□□□ -1.39
TPM1P09493 SNORA64.3-201ENST00000365647 134 ntBASIC6.34□□□□□ -1.39
TPM1P09493 ARSFP1-201ENST00000398758 477 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms