Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SH2D1AO60880 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SH2D1AO60880 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC4.26□□□□□ -1.73
SH2D1AO60880 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SH2D1AO60880 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC4.25□□□□□ -1.73
SH2D1AO60880 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SH2D1AO60880 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.25□□□□□ -1.73
SH2D1AO60880 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SH2D1AO60880 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC4.25□□□□□ -1.73
SH2D1AO60880 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC4.25□□□□□ -1.73
SH2D1AO60880 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SH2D1AO60880 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SH2D1AO60880 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SH2D1AO60880 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SH2D1AO60880 RNA5SP110-201ENST00000362638 115 ntBASIC4.25□□□□□ -1.73
SH2D1AO60880 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC4.25□□□□□ -1.73
SH2D1AO60880 AC005042.1-201ENST00000393397 800 ntBASIC4.25□□□□□ -1.73
SH2D1AO60880 ARSFP1-201ENST00000398758 477 ntBASIC4.25□□□□□ -1.73
SH2D1AO60880 PSMA6P1-201ENST00000400275 741 ntBASIC4.25□□□□□ -1.73
SH2D1AO60880 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SH2D1AO60880 NPM1P38-201ENST00000403835 865 ntBASIC4.25□□□□□ -1.73
SH2D1AO60880 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.25□□□□□ -1.73
SH2D1AO60880 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SH2D1AO60880 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC4.25□□□□□ -1.73
SH2D1AO60880 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.25□□□□□ -1.73
SH2D1AO60880 KIF4CP-201ENST00000422742 1279 ntBASIC4.25□□□□□ -1.73
SH2D1AO60880 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC4.25□□□□□ -1.73
SH2D1AO60880 GAPDHP19-201ENST00000431768 1005 ntBASIC4.25□□□□□ -1.73
SH2D1AO60880 AC092601.1-201ENST00000444526 383 ntBASIC4.25□□□□□ -1.73
SH2D1AO60880 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.25□□□□□ -1.73
SH2D1AO60880 RBMY2HP-201ENST00000457961 720 ntBASIC4.25□□□□□ -1.73
SH2D1AO60880 H3F3AP5-201ENST00000475267 429 ntBASIC4.25□□□□□ -1.73
SH2D1AO60880 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SH2D1AO60880 AP002453.1-201ENST00000492327 668 ntBASIC4.25□□□□□ -1.73
SH2D1AO60880 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC4.25□□□□□ -1.73
SH2D1AO60880 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SH2D1AO60880 MAST4-IT1-201ENST00000514241 658 ntBASIC4.25□□□□□ -1.73
SH2D1AO60880 FAU-203ENST00000525297 355 ntTSL 5 BASIC4.25□□□□□ -1.73
SH2D1AO60880 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC4.25□□□□□ -1.73
SH2D1AO60880 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC4.25□□□□□ -1.73
SH2D1AO60880 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC4.25□□□□□ -1.73
SH2D1AO60880 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC4.25□□□□□ -1.73
SH2D1AO60880 LINC01613-201ENST00000561476 2780 ntBASIC4.25□□□□□ -1.73
SH2D1AO60880 DHFRP1-201ENST00000579682 559 ntBASIC4.25□□□□□ -1.73
SH2D1AO60880 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC4.25□□□□□ -1.73
SH2D1AO60880 AC012368.3-201ENST00000604190 219 ntBASIC4.25□□□□□ -1.73
SH2D1AO60880 AL049829.3-202ENST00000604278 711 ntBASIC4.25□□□□□ -1.73
SH2D1AO60880 IGKV2OR2-7-201ENST00000604652 304 ntBASIC4.25□□□□□ -1.73
SH2D1AO60880 AC092681.3-201ENST00000609463 678 ntBASIC4.25□□□□□ -1.73
SH2D1AO60880 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC4.25□□□□□ -1.73
SH2D1AO60880 AL080312.2-201ENST00000613001 630 ntBASIC4.25□□□□□ -1.73
SH2D1AO60880 MIR6736-201ENST00000616799 59 ntBASIC4.25□□□□□ -1.73
SH2D1AO60880 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.25□□□□□ -1.73
SH2D1AO60880 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SH2D1AO60880 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC4.25□□□□□ -1.73
SH2D1AO60880 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
SH2D1AO60880 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SH2D1AO60880 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.25□□□□□ -1.73
SH2D1AO60880 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
SH2D1AO60880 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SH2D1AO60880 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SH2D1AO60880 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SH2D1AO60880 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SH2D1AO60880 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SH2D1AO60880 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SH2D1AO60880 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SH2D1AO60880 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC4.24□□□□□ -1.73
SH2D1AO60880 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SH2D1AO60880 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
SH2D1AO60880 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SH2D1AO60880 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
SH2D1AO60880 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC4.24□□□□□ -1.73
SH2D1AO60880 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SH2D1AO60880 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
SH2D1AO60880 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
SH2D1AO60880 MIR130A-201ENST00000385274 89 ntBASIC4.24□□□□□ -1.73
SH2D1AO60880 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SH2D1AO60880 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SH2D1AO60880 RN7SKP108-201ENST00000411367 328 ntBASIC4.24□□□□□ -1.73
SH2D1AO60880 RPL35AP3-201ENST00000414680 288 ntBASIC4.24□□□□□ -1.73
SH2D1AO60880 MEAF6P1-201ENST00000416092 327 ntBASIC4.24□□□□□ -1.73
SH2D1AO60880 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SH2D1AO60880 HYALP1-201ENST00000417674 1279 ntBASIC4.24□□□□□ -1.73
SH2D1AO60880 MYB-206ENST00000420123 1051 ntTSL 5 BASIC4.24□□□□□ -1.73
SH2D1AO60880 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC4.24□□□□□ -1.73
SH2D1AO60880 VN1R20P-201ENST00000425215 966 ntBASIC4.24□□□□□ -1.73
SH2D1AO60880 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
SH2D1AO60880 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC4.24□□□□□ -1.73
SH2D1AO60880 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.24□□□□□ -1.73
SH2D1AO60880 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC4.24□□□□□ -1.73
SH2D1AO60880 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC4.24□□□□□ -1.73
SH2D1AO60880 NDUFB4P8-201ENST00000435351 367 ntBASIC4.24□□□□□ -1.73
SH2D1AO60880 PCBP2P1-201ENST00000437262 977 ntBASIC4.24□□□□□ -1.73
SH2D1AO60880 ARMC4P1-201ENST00000438905 707 ntBASIC4.24□□□□□ -1.73
SH2D1AO60880 AC245291.3-201ENST00000443400 292 ntBASIC4.24□□□□□ -1.73
SH2D1AO60880 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC4.24□□□□□ -1.73
SH2D1AO60880 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC4.24□□□□□ -1.73
SH2D1AO60880 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC4.24□□□□□ -1.73
SH2D1AO60880 RN7SL393P-201ENST00000463588 296 ntBASIC4.24□□□□□ -1.73
SH2D1AO60880 RPS7P10-201ENST00000464254 603 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms